Information for 5-GWCCTCCGGGTTATCT (Motif 13)

C A T G C G A T A T G C A G T C G C A T A T G C G T A C A T C G C T A G A C T G C G A T A G C T G C T A A G C T A T G C A G C T
Reverse Opposite:
T C G A A T C G C T G A C G A T T C G A C G T A T A G C A G T C T A G C A C T G A T C G C G T A A C T G A T C G C G T A G T A C
p-value:1e-9
log p-value:-2.288e+01
Information Content per bp:1.687
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif15.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets50.2 +/- 27.1bp
Average Position of motif in Background46.6 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ELF1/MA0473.2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GWCCTCCGGGTTATCT
NACTTCCGGGTT----
 C A T G C G A T A T G C A G T C G C A T A T G C G T A C A T C G C T A G A C T G C G A T A G C T G C T A A G C T A T G C A G C T
A G T C C T G A G A T C C G A T A G C T A G T C A G T C A C T G A T C G C A T G C G A T G C A T A C G T A C G T A C G T A C G T

ELF4/MA0641.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GWCCTCCGGGTTATCT
CACTTCCGGGTT----
 C A T G C G A T A T G C A G T C G C A T A T G C G T A C A T C G C T A G A C T G C G A T A G C T G C T A A G C T A T G C A G C T
G A T C T C G A A G T C C A G T G A C T G T A C A G T C A C T G A T C G C A T G C G A T G C A T A C G T A C G T A C G T A C G T

ELF3/MA0640.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GWCCTCCGGGTTATCT
TTACTTCCGGGTT----
 A C G T C A T G C G A T A T G C A G T C G C A T A T G C G T A C A T C G C T A G A C T G C G A T A G C T G C T A A G C T A T G C A G C T
G A C T G A C T C T G A G A T C C G A T A C G T T G A C A G T C A C T G A T C G A T C G C G A T C G A T A C G T A C G T A C G T A C G T

EHF/MA0598.2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GWCCTCCGGGTTATCT
TACTTCCGGGTT----
 C A T G C G A T A T G C A G T C G C A T A T G C G T A C A T C G C T A G A C T G C G A T A G C T G C T A A G C T A T G C A G C T
G A C T C T G A A G T C A C G T C A G T A G T C A G T C A C T G A T C G A T C G C G A T C G A T A C G T A C G T A C G T A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GWCCTCCGGGTTATCT
TACATCCGGGT-----
 C A T G C G A T A T G C A G T C G C A T A T G C G T A C A T C G C T A G A C T G C G A T A G C T G C T A A G C T A T G C A G C T
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T A C G T A C G T A C G T A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GWCCTCCGGGTTATCT
TGACCTCTCNNTGACCT
 A C G T C A T G C G A T A T G C A G T C G C A T A T G C G T A C A T C G C T A G A C T G C G A T A G C T G C T A A G C T A T G C A G C T
G A C T T A C G G T C A T G A C A G T C A C G T A T G C G A C T A G T C A T G C T C A G A G C T T A C G G T C A G T A C A G T C A G C T

ZBTB7C/MA0695.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GWCCTCCGGGTTATCT
GCGACCACCGAA------
 A C G T A C G T C A T G C G A T A T G C A G T C G C A T A T G C G T A C A T C G C T A G A C T G C G A T A G C T G C T A A G C T A T G C A G C T
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GWCCTCCGGGTTATCT
WTGSCCTSAGGS------
 A C G T A C G T C A T G C G A T A T G C A G T C G C A T A T G C G T A C A T C G C T A G A C T G C G A T A G C T G C T A A G C T A T G C A G C T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GWCCTCCGGGTTATCT
GTACATCCGGATTTTT-
 A C G T C A T G C G A T A T G C A G T C G C A T A T G C G T A C A T C G C T A G A C T G C G A T A G C T G C T A A G C T A T G C A G C T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GWCCTCCGGGTTATCT
BTGACCTCTNNHTGACCY
 A C G T A C G T C A T G C G A T A T G C A G T C G C A T A T G C G T A C A T C G C T A G A C T G C G A T A G C T G C T A A G C T A T G C A G C T
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T