Information for 6-CTRTKTWTWTTGG (Motif 6)

A T G C A C G T C T G A A C G T A C G T A C G T C G T A A C G T G C A T A C G T A C G T C T A G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A C G T A C G T A C G A T C G T A G T C A C G T A A G C T C G T A A T C G
p-value:1e-11
log p-value:-2.672e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.0 +/- 12.5bp
Average Position of motif in Background36.3 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-CTRTKTWTWTTGG--
NNTGTTTATTTTGGCA
 A C G T A T G C A C G T C T G A A C G T A C G T A C G T C G T A A C G T G C A T A C G T A C G T C T A G A C T G A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

PH0057.1_Hoxb13/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTRTKTWTWTTGG---
NNAATTTTATTGGNTN
 A T G C A C G T C T G A A C G T A C G T A C G T C G T A A C G T G C A T A C G T A C G T C T A G A C T G A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CTRTKTWTWTTGG
---TTTTTATTGG
 A T G C A C G T C T G A A C G T A C G T A C G T C G T A A C G T G C A T A C G T A C G T C T A G A C T G
A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

HOXB13/MA0901.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CTRTKTWTWTTGG
---NTTTTATTGG
 A T G C A C G T C T G A A C G T A C G T A C G T C G T A A C G T G C A T A C G T A C G T C T A G A C T G
A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTRTKTWTWTTGG---
-NNTTTNTTTTNGNNN
 A T G C A C G T C T G A A C G T A C G T A C G T C G T A A C G T G C A T A C G T A C G T C T A G A C T G A C G T A C G T A C G T
A C G T C G T A C G A T A G C T C G A T A C G T C G A T C G A T C G A T A G C T G C A T T A G C A T C G T A C G A T G C G A C T

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CTRTKTWTWTTGG
---NTTTTATTGG
 A T G C A C G T C T G A A C G T A C G T A C G T C G T A A C G T G C A T A C G T A C G T C T A G A C T G
A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTRTKTWTWTTGG
-TGTTTATTT---
 A T G C A C G T C T G A A C G T A C G T A C G T C G T A A C G T G C A T A C G T A C G T C T A G A C T G
A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTRTKTWTWTTGG---
NNANTTTTATTGGNNN
 A T G C A C G T C T G A A C G T A C G T A C G T C G T A A C G T G C A T A C G T A C G T C T A G A C T G A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:9
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CTRTKTWTWTTGG-
----TTTTATKRGG
 A T G C A C G T C T G A A C G T A C G T A C G T C G T A A C G T G C A T A C G T A C G T C T A G A C T G A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

Foxa2/MA0047.2/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTRTKTWTWTTGG
-TGTTTACTTAGG
 A T G C A C G T C T G A A C G T A C G T A C G T C G T A A C G T G C A T A C G T A C G T C T A G A C T G
A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G