Information for 17-GAGGACATCCTCT (Motif 30)

A T C G C G T A A C T G A C T G G T C A A G T C C T G A A C G T A G T C A G T C A C G T A G T C A G C T
Reverse Opposite:
C T G A A C T G C G T A A C T G A C T G G T C A A G C T C T A G A C G T A G T C A G T C A C G T A T G C
p-value:1e-5
log p-value:-1.368e+01
Information Content per bp:1.860
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.2 +/- 28.2bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAGGACATCCTCT---
GATAACATCCTAGTAG
 A T C G C G T A A C T G A C T G G T C A A G T C C T G A A C G T A G T C A G T C A C G T A G T C A G C T A C G T A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GAGGACATCCTCT
---CACTTCCTCT
 A T C G C G T A A C T G A C T G G T C A A G T C C T G A A C G T A G T C A G T C A C G T A G T C A G C T
A C G T A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

BATF3/MA0835.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAGGACATCCTCT
TGATGACGTCATCA
 A C G T A T C G C G T A A C T G A C T G G T C A A G T C C T G A A C G T A G T C A G T C A C G T A G T C A G C T
G A C T C T A G T C G A C G A T A C T G C G T A G T A C C T A G A C G T G T A C C G T A A G C T G T A C C T G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGGACATCCTCT
TRAGGTCA------
 A C G T A T C G C G T A A C T G A C T G G T C A A G T C C T G A A C G T A G T C A G T C A C G T A G T C A G C T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GAGGACATCCTCT-
----ACTTCCTGTT
 A T C G C G T A A C T G A C T G G T C A A G T C C T G A A C G T A G T C A G T C A C G T A G T C A G C T A C G T
A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAGGACATCCTCT--
NATGACATCATCNNN
 A T C G C G T A A C T G A C T G G T C A A G T C C T G A A C G T A G T C A G T C A C G T A G T C A G C T A C G T A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGGACATCCTCT--
VAGRACAKNCTGTBC
 A T C G C G T A A C T G A C T G G T C A A G T C C T G A A C G T A G T C A G T C A C G T A G T C A G C T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

JUN/MA0488.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAGGACATCCTCT-
-ATGACATCATCNN
 A T C G C G T A A C T G A C T G G T C A A G T C C T G A A C G T A G T C A G T C A C G T A G T C A G C T A C G T
A C G T T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAGGACATCCTCT-
--NNAYTTCCTGHN
 A T C G C G T A A C T G A C T G G T C A A G T C C T G A A C G T A G T C A G T C A C G T A G T C A G C T A C G T
A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGGACATCCTCT--
VAGRACAKWCTGTYC
 A T C G C G T A A C T G A C T G G T C A A G T C C T G A A C G T A G T C A G T C A C G T A G T C A G C T A C G T A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C