Information for 14-CCCCGTCGCCTCGTGG (Motif 26)

A G T C A G T C A G T C A G T C A C T G A C G T A G T C A C T G A G T C A G T C A C G T A G T C A C T G A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A G T C A C T G C G T A A C T G A C T G A G T C A C T G C G T A A G T C A C T G A C T G A C T G A C T G
p-value:1e-7
log p-value:-1.627e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.8 +/- 16.5bp
Average Position of motif in Background34.5 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCCCGTCGCCTCGTGG---
TAGCGCCCCCTGGTGGCCA
 A G T C A G T C A G T C A G T C A C T G A C G T A G T C A C T G A G T C A G T C A C G T A G T C A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCCCGTCGCCTCGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C T G A C G T A G T C A C T G A G T C A G T C A C G T A G T C A C T G A C G T A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CCCCGTCGCCTCGTGG
------NNCCACGTGG
 A G T C A G T C A G T C A G T C A C T G A C G T A G T C A C T G A G T C A G T C A C G T A G T C A C T G A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCCCGTCGCCTCGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A G T C A G T C A G T C A G T C A C T G A C G T A G T C A C T G A G T C A G T C A C G T A G T C A C T G A C G T A C T G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Creb3l2/MA0608.1/Jaspar

Match Rank:5
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CCCCGTCGCCTCGTGG
-------GCCACGTGT
 A G T C A G T C A G T C A G T C A C T G A C G T A G T C A C T G A G T C A G T C A C G T A G T C A C T G A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T

Mycn/MA0104.3/Jaspar

Match Rank:6
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CCCCGTCGCCTCGTGG
-------GCCACGTG-
 A G T C A G T C A G T C A G T C A C T G A C G T A G T C A C T G A G T C A G T C A C G T A G T C A C T G A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CCCCGTCGCCTCGTGG
------NNCCACGTGG
 A G T C A G T C A G T C A G T C A C T G A C G T A G T C A C T G A G T C A G T C A C G T A G T C A C T G A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CCCCGTCGCCTCGTGG
-------NCCACGTG-
 A G T C A G T C A G T C A G T C A C T G A C G T A G T C A C T G A G T C A G T C A C G T A G T C A C T G A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T

PB0179.1_Sp100_2/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCCCGTCGCCTCGTGG
-TCCGTCGCTTAAAAG
 A G T C A G T C A G T C A G T C A C T G A C G T A G T C A C T G A G T C A G T C A C G T A G T C A C T G A C G T A C T G A C T G
A C G T A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

SP2/MA0516.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCCCGTCGCCTCGTGG
GCCCCGCCCCCTCCC--
 A C G T A G T C A G T C A G T C A G T C A C T G A C G T A G T C A C T G A G T C A G T C A C G T A G T C A C T G A C G T A C T G A C T G
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T A C G T