Information for 16-GGGVMCCCGCTCG (Motif 25)

A C T G C T A G A C T G T C G A T G C A A T G C A T G C A G T C A T C G A T G C A G C T A G T C C T A G
Reverse Opposite:
G A T C T A C G T C G A A T C G A T G C C T A G A T C G A T C G A C G T A G C T A G T C A G T C A G T C
p-value:1e-8
log p-value:-1.878e+01
Information Content per bp:1.745
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif146.2
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets42.6 +/- 27.2bp
Average Position of motif in Background52.7 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GGGVMCCCGCTCG
NNNGGGGCGCCCCCNN-
 A C G T A C G T A C G T A C G T A C T G C T A G A C T G T C G A T G C A A T G C A T G C A G T C A T C G A T G C A G C T A G T C C T A G
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGGVMCCCGCTCG
--GGTCCCGCCC-
 A C T G C T A G A C T G T C G A T G C A A T G C A T G C A G T C A T C G A T G C A G C T A G T C C T A G
A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGGVMCCCGCTCG
SNGCACCTGCHS-
 A C T G C T A G A C T G T C G A T G C A A T G C A T G C A G T C A T C G A T G C A G C T A G T C C T A G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GGGVMCCCGCTCG
NNNNTTGGGCACNNCN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G T C G A T G C A A T G C A T G C A G T C A T C G A T G C A G C T A G T C C T A G
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGGVMCCCGCTCG
AGGGGATTCCCCT--
 A C G T A C G T A C T G C T A G A C T G T C G A T G C A A T G C A T G C A G T C A T C G A T G C A G C T A G T C C T A G
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGGVMCCCGCTCG-
--GGCCCCGCCCCC
 A C T G C T A G A C T G T C G A T G C A A T G C A T G C A G T C A T C G A T G C A G C T A G T C C T A G A C G T
A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGGVMCCCGCTCG--
GGCCYCCTGCTGDGH
 A C T G C T A G A C T G T C G A T G C A A T G C A T G C A G T C A T C G A T G C A G C T A G T C C T A G A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

NFKB2/MA0778.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGGVMCCCGCTCG
AGGGGATTCCCCT--
 A C G T A C G T A C T G C T A G A C T G T C G A T G C A A T G C A T G C A G T C A T C G A T G C A G C T A G T C C T A G
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGGVMCCCGCTCG
GGGGGAATCCCC---
 A C G T A C G T A C T G C T A G A C T G T C G A T G C A A T G C A T G C A G T C A T C G A T G C A G C T A G T C C T A G
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGGVMCCCGCTCG
GTGGGCCCCA-----
 A C G T A C G T A C T G C T A G A C T G T C G A T G C A A T G C A T G C A G T C A T C G A T G C A G C T A G T C C T A G
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T