Information for 8-GCGGGCAGGAGAGSCA (Motif 18)

A T C G T A G C T C A G A C T G T A C G A T G C T C G A C T A G T A C G T C G A A C T G G C T A A C T G T A C G A G T C G T C A
Reverse Opposite:
A C G T T A C G A T G C T G A C C A G T G T A C A G C T A T G C A G T C A G C T T A C G A T G C A G T C A G T C A T C G A T G C
p-value:1e-9
log p-value:-2.090e+01
Information Content per bp:1.673
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif79.9
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets45.4 +/- 22.3bp
Average Position of motif in Background56.1 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGCAGGAGAGSCA
TNNGGGCAG--------
 A C G T A T C G T A G C T C A G A C T G T A C G A T G C T C G A C T A G T A C G T C G A A C T G G C T A A C T G T A C G A G T C G T C A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCGGGCAGGAGAGSCA
--GGGCGGGAAGG---
 A T C G T A G C T C A G A C T G T A C G A T G C T C G A C T A G T A C G T C G A A C T G G C T A A C T G T A C G A G T C G T C A
A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:3
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GCGGGCAGGAGAGSCA
-----CAGGTGAGG--
 A T C G T A G C T C A G A C T G T A C G A T G C T C G A C T A G T A C G T C G A A C T G G C T A A C T G T A C G A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GCGGGCAGGAGAGSCA
---GGGAGGACNG---
 A T C G T A G C T C A G A C T G T A C G A T G C T C G A C T A G T A C G T C G A A C T G G C T A A C T G T A C G A G T C G T C A
A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GCGGGCAGGAGAGSCA
--GGGCGGGAAGG---
 A T C G T A G C T C A G A C T G T A C G A T G C T C G A C T A G T A C G T C G A A C T G G C T A A C T G T A C G A G T C G T C A
A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:6
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GCGGGCAGGAGAGSCA
NNTNNGGGGCGGNGNGN--
 A C G T A C G T A C G T A T C G T A G C T C A G A C T G T A C G A T G C T C G A C T A G T A C G T C G A A C T G G C T A A C T G T A C G A G T C G T C A
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:GCGGGCAGGAGAGSCA
-----CTYRAGTGSY-
 A T C G T A G C T C A G A C T G T A C G A T G C T C G A C T A G T A C G T C G A A C T G G C T A A C T G T A C G A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GCGGGCAGGAGAGSCA
--GGGCGGGACC----
 A T C G T A G C T C A G A C T G T A C G A T G C T C G A C T A G T A C G T C G A A C T G G C T A A C T G T A C G A G T C G T C A
A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:GCGGGCAGGAGAGSCA
-----CTTGAGTGGCT
 A T C G T A G C T C A G A C T G T A C G A T G C T C G A C T A G T A C G T C G A A C T G G C T A A C T G T A C G A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GCGGGCAGGAGAGSCA
-AAGGCAAGTGT----
 A T C G T A G C T C A G A C T G T A C G A T G C T C G A C T A G T A C G T C G A A C T G G C T A A C T G T A C G A G T C G T C A
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T