Information for 5-ACAGAAGGCA (Motif 16)

C T G A A G T C C T G A A C T G G C T A G C T A C A T G A T C G A T G C C G T A
Reverse Opposite:
C G A T A T C G A T G C G T A C C G A T C G A T A G T C G A C T A C T G G A C T
p-value:1e-9
log p-value:-2.175e+01
Information Content per bp:1.762
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif320.6
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets50.7 +/- 29.5bp
Average Position of motif in Background49.6 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-ACAGAAGGCA
AACAGATGGC-
 A C G T C T G A A G T C C T G A A C T G G C T A G C T A C A T G A T C G A T G C C G T A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ACAGAAGGCA
AACAGATGGT-
 A C G T C T G A A G T C C T G A A C T G G C T A G C T A C A T G A T C G A T G C C G T A
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ACAGAAGGCA
AACAKATGGY-
 A C G T C T G A A G T C C T G A A C T G G C T A G C T A C A T G A T C G A T G C C G T A
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACAGAAGGCA-
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T C T G A A G T C C T G A A C T G G C T A G C T A C A T G A T C G A T G C C G T A A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACAGAAGGCA---
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T C T G A A G T C C T G A A C T G G C T A G C T A C A T G A T C G A T G C C G T A A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACAGAAGGCA-
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T C T G A A G T C C T G A A C T G G C T A G C T A C A T G A T C G A T G C C G T A A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACAGAAGGCA
CACAGN-----
 A C G T C T G A A G T C C T G A A C T G G C T A G C T A C A T G A T C G A T G C C G T A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACAGAAGGCA
TGACAGCTGTCA
 A C G T A C G T C T G A A G T C C T G A A C T G G C T A G C T A C A T G A T C G A T G C C G T A
G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A

PKNOX1/MA0782.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACAGAAGGCA
TGACAGGTGTCA
 A C G T A C G T C T G A A G T C C T G A A C T G G C T A G C T A C A T G A T C G A T G C C G T A
G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACAGAAGGCA-
CACAGCAGGGGG
 A C G T C T G A A G T C C T G A A C T G G C T A G C T A C A T G A T C G A T G C C G T A A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G