Information for 5-WYCCTGCKGCSTYTGG (Motif 14)

C G A T A G C T A G T C A G T C A C G T A C T G A T G C A C T G A C T G A G T C A T C G A C G T A G C T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C G T C A C T G A C G T A T A C G A C T G A G T C G T A C A T C G G T A C C G T A A C T G A C T G C T G A G C T A
p-value:1e-10
log p-value:-2.460e+01
Information Content per bp:1.859
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.4 +/- 36.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-WYCCTGCKGCSTYTGG
CCCCCTGCTGTG-----
 A C G T C G A T A G C T A G T C A G T C A C G T A C T G A T G C A C T G A C T G A G T C A T C G A C G T A G C T A C G T A C T G A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-WYCCTGCKGCSTYTGG
TCNCCTGCTGNGNNN--
 A C G T C G A T A G C T A G T C A G T C A C G T A C T G A T G C A C T G A C T G A G T C A T C G A C G T A G C T A C G T A C T G A C T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-WYCCTGCKGCSTYTGG
TNTCCTGCTGTGNNG--
 A C G T C G A T A G C T A G T C A G T C A C G T A C T G A T G C A C T G A C T G A G T C A T C G A C G T A G C T A C G T A C T G A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---WYCCTGCKGCSTYTGG
GGCCYCCTGCTGDGH----
 A C G T A C G T A C G T C G A T A G C T A G T C A G T C A C G T A C T G A T G C A C T G A C T G A G T C A T C G A C G T A G C T A C G T A C T G A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-WYCCTGCKGCSTYTGG
NNTCCTGCTGTGNNN--
 A C G T C G A T A G C T A G T C A G T C A C G T A C T G A T G C A C T G A C T G A G T C A T C G A C G T A G C T A C G T A C T G A C T G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:WYCCTGCKGCSTYTGG
--CCTGCTGAGH----
 C G A T A G C T A G T C A G T C A C G T A C T G A T G C A C T G A C T G A G T C A T C G A C G T A G C T A C G T A C T G A C T G
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:WYCCTGCKGCSTYTGG
TGCCTGAGGCN-----
 C G A T A G C T A G T C A G T C A C G T A C T G A T G C A C T G A C T G A G T C A T C G A C G T A G C T A C G T A C T G A C T G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:WYCCTGCKGCSTYTGG
TGCCTGCGYCMCCTT-
 C G A T A G C T A G T C A G T C A C G T A C T G A T G C A C T G A C T G A G T C A T C G A C G T A G C T A C G T A C T G A C T G
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:WYCCTGCKGCSTYTGG
NGCCTNAGGCN-----
 C G A T A G C T A G T C A G T C A C G T A C T G A T G C A C T G A C T G A G T C A T C G A C G T A G C T A C G T A C T G A C T G
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:WYCCTGCKGCSTYTGG
NGCCTGAGGCN-----
 C G A T A G C T A G T C A G T C A C G T A C T G A T G C A C T G A C T G A G T C A T C G A C G T A G C T A C G T A C T G A C T G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T A C G T