Information for 8-GGGCATCTTCCGC (Motif 13)

A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A T G C A T G C A C T G A G T C
Reverse Opposite:
A C T G A G T C A T C G A T C G G T C A C G T A A C T G C G T A A C G T A C T G A G T C G T A C A G T C
p-value:1e-10
log p-value:-2.460e+01
Information Content per bp:1.915
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.6 +/- 13.3bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGGCATCTTCCGC
NGTGGGCAT-------
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A T G C A T G C A C T G A G T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GGGCATCTTCCGC
NNNNTTGGGCACNNCN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A T G C A T G C A C T G A G T C
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGGCATCTTCCGC--
---CAACGTCCGCGG
 A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A T G C A T G C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

ETV6/MA0645.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGGCATCTTCCGC-
----CACTTCCGCT
 A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A T G C A T G C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G A T C T C G A A G T C G C A T A G C T G T A C G T A C A C T G T A G C A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGGCATCTTCCGC-----
--CCGTCTTCCCCCTCAC
 A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A T G C A T G C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGGCATCTTCCGC
SNGCACCTGCHS-
 A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A T G C A T G C A C T G A G T C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGGCATCTTCCGC
--NCCACTTCCGG
 A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A T G C A T G C A C T G A G T C
A C G T A C G T A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGGCATCTTCCGC
GARTGGTCATCGCCC--
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A T G C A T G C A C T G A G T C
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C A C G T A C G T

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGGCATCTTCCGC--
-----ACTTCCGGNT
 A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A T G C A T G C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T G A C T A G T C A T G C A C T G A T C G A C G T G A C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGGCATCTTCCGC
-NVCAGCTGBBNN
 A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A T G C A T G C A C T G A G T C
A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C