Information for 22-TGCGGGCTGT (Motif 40)

A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G A G T C A G T C A G T C A C T G A G T C C G T A
p-value:1e-2
log p-value:-5.336e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets64.2 +/- 30.3bp
Average Position of motif in Background32.3 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0024.1_Gcm1_1/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TGCGGGCTGT-
NNNNATGCGGGTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C G T A C T G A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGCGGGCTGT
TATGCGGGTA--
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C G T A C T G A C G T
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGCGGGCTGT
TNNGGGCAG-
 A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C G T A C T G A C G T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TGCGGGCTGT-
-----GCTGTG
 A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

GCM1/MA0646.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGCGGGCTGT
CATGCGGGTAC-
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C G T A C T G A C G T
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGCGGGCTGT
----NGCTN-
 A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGCGGGCTGT-
CTTCGCGGGGGGTC
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C G T A C T G A C G T A C G T
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGCGGGCTGT
TTTGCGGTTT--
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C G T A C T G A C G T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGCGGGCTGT
TTGCGGTTT--
 A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C G T A C T G A C G T
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGCGGGCTGT
TTGCGTGCVA-
 A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C G T A C T G A C G T
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T