Information for 9-GAWGATACAT (Motif 19)

A C T G C T G A C G A T A C T G C G T A A C G T C G T A A G T C C G T A C A G T
Reverse Opposite:
G T C A C G A T A C T G A C G T G T C A A C G T A G T C C G T A A G C T A G T C
p-value:1e-8
log p-value:-1.974e+01
Information Content per bp:1.822
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.3 +/- 25.6bp
Average Position of motif in Background57.2 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GAWGATACAT-
NTTGATACATT
 A C T G C T G A C G A T A C T G C G T A A C G T C G T A A G T C C G T A C A G T A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAWGATACAT-
GATGAGTCATN
 A C T G C T G A C G A T A C T G C G T A A C G T C G T A A G T C C G T A C A G T A C G T
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAWGATACAT----
AGATGCTRCTRCCHT
 A C G T A C T G C T G A C G A T A C T G C G T A A C G T C G T A A G T C C G T A C A G T A C G T A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAWGATACAT--
GATGAGTCATCC
 A C T G C T G A C G A T A C T G C G T A A C G T C G T A A G T C C G T A C A G T A C G T A C G T
C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C

JUNB/MA0490.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAWGATACAT
GGATGACTCAT
 A C G T A C T G C T G A C G A T A C T G C G T A A C G T C G T A A G T C C G T A C A G T
C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T

PH0161.1_Six1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GAWGATACAT----
ANNNATGATACCCCATC
 A C G T A C G T A C G T A C T G C T G A C G A T A C T G C G T A A C G T C G T A A G T C C G T A C A G T A C G T A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAWGATACAT
GATGAGTCAT
 A C T G C T G A C G A T A C T G C G T A A C G T C G T A A G T C C G T A C A G T
T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T

FOSL2/MA0478.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAWGATACAT
GGATGACTCAT
 A C G T A C T G C T G A C G A T A C T G C G T A A C G T C G T A A G T C C G T A C A G T
A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAWGATACAT--
NATGACTCATNN
 A C T G C T G A C G A T A C T G C G T A A C G T C G T A A G T C C G T A C A G T A C G T A C G T
C T A G T C G A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A G C T G A T C G T A C

JDP2/MA0655.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAWGATACAT
-ATGAGTCAT
 A C T G C T G A C G A T A C T G C G T A A C G T C G T A A G T C C G T A C A G T
A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T