Information for 7-TTGCCTTCGC (Motif 17)

A G C T A G C T A C T G G T A C A G T C A C G T A C G T A G T C A T C G A G T C
Reverse Opposite:
A C T G A T G C A C T G C G T A C G T A A C T G A C T G T G A C T C G A C T G A
p-value:1e-10
log p-value:-2.482e+01
Information Content per bp:1.866
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif42.3
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets46.1 +/- 23.2bp
Average Position of motif in Background40.4 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TTGCCTTCGC
---GCTTCC-
 A G C T A G C T A C T G G T A C A G T C A C G T A C G T A G T C A T C G A G T C
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTGCCTTCGC
NNACTTGCCTT---
 A C G T A C G T A C G T A C G T A G C T A G C T A C T G G T A C A G T C A C G T A C G T A G T C A T C G A G T C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTGCCTTCGC
TTGACTTTT-
 A G C T A G C T A C T G G T A C A G T C A C G T A C G T A G T C A T C G A G T C
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTGCCTTCGC
BNTGDCCTTG--
 A C G T A C G T A G C T A G C T A C T G G T A C A G T C A C G T A C G T A G T C A T C G A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTGCCTTCGC--
NGTTGCCATGGCAA
 A C G T A C G T A G C T A G C T A C T G G T A C A G T C A C G T A C G T A G T C A T C G A G T C A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTGCCTTCGC--
KGCCCTTCCCCA
 A G C T A G C T A C T G G T A C A G T C A C G T A C G T A G T C A T C G A G T C A C G T A C G T
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

PB0161.1_Rxra_2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTGCCTTCGC--
NNNNCAACCTTCGNGA
 A C G T A C G T A C G T A C G T A G C T A G C T A C T G G T A C A G T C A C G T A C G T A G T C A T C G A G T C A C G T A C G T
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTGCCTTCGC
TGACCTTGAV
 A G C T A G C T A C T G G T A C A G T C A C G T A C G T A G T C A T C G A G T C
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCTTCGC
CTGACCTTTG-
 A C G T A G C T A G C T A C T G G T A C A G T C A C G T A C G T A G T C A T C G A G T C
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TTGCCTTCGC--
GGTTGCCATGGCAA
 A C G T A C G T A G C T A G C T A C T G G T A C A G T C A C G T A C G T A G T C A T C G A G T C A C G T A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A