p-value: | 1e-10 |
log p-value: | -2.521e+01 |
Information Content per bp: | 1.879 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.74% |
Number of Background Sequences with motif | 1.3 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 44.3 +/- 27.9bp |
Average Position of motif in Background | 70.0 +/- 6.4bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.20 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Atf1/MA0604.1/Jaspar
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CGTTACGAAC -ATGACGTA- |
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HOXC12/MA0906.1/Jaspar
Match Rank: | 2 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CGTTACGAAC NTTTTACGACC |
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HOXC11/MA0651.1/Jaspar
Match Rank: | 3 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CGTTACGAAC NTTTTACGACC |
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GMEB2/MA0862.1/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CGTTACGAAC --TTACGTAA |
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Hoxa11/MA0911.1/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CGTTACGAAC ANTTTTACGACC |
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PH0067.1_Hoxc12/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CGTTACGAAC--- GNNNTTTTACGACCTNA |
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Gmeb1/MA0615.1/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CGTTACGAAC----- GAGTGTACGTAAGATGG |
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PB0027.1_Gmeb1_1/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CGTTACGAAC----- GAGTGTACGTAAGATGG |
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HOXD12/MA0873.1/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CGTTACGAAC NTTTTACGACT |
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PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CGTTACGAAC--- ACCGTGACTAATTNN |
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