Information for 6-GGTTACMCTGCCATSG (Motif 12)

T A C G A T C G A C G T A C G T T C G A A G T C T G C A T A G C A G C T A T C G G T A C A G T C G T C A C G A T A T G C T A C G
Reverse Opposite:
A G T C A T C G C G T A C A G T A C T G A C T G A T G C T C G A A C T G A C G T A C T G A G C T G T C A T G C A T A G C A T G C
p-value:1e-11
log p-value:-2.542e+01
Information Content per bp:1.693
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif15.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets51.8 +/- 22.0bp
Average Position of motif in Background54.6 +/- 35.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.59
Offset:7
Orientation:forward strand
Alignment:GGTTACMCTGCCATSG
-------TTGCCAAG-
 T A C G A T C G A C G T A C G T T C G A A G T C T G C A T A G C A G C T A T C G G T A C A G T C G T C A C G A T A T G C T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGTTACMCTGCCATSG
GGTCANNGTGACCTN-
 T A C G A T C G A C G T A C G T T C G A A G T C T G C A T A G C A G C T A T C G G T A C A G T C G T C A C G A T A T G C T A C G
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.58
Offset:7
Orientation:forward strand
Alignment:GGTTACMCTGCCATSG
-------ATGCCAACC
 T A C G A T C G A C G T A C G T T C G A A G T C T G C A T A G C A G C T A T C G G T A C A G T C G T C A C G A T A T G C T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GGTTACMCTGCCATSG
------CGTGCCAAG-
 T A C G A T C G A C G T A C G T T C G A A G T C T G C A T A G C A G C T A T C G G T A C A G T C G T C A C G A T A T G C T A C G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GGTTACMCTGCCATSG
------GGTGCCAAGT
 T A C G A T C G A C G T A C G T T C G A A G T C T G C A T A G C A G C T A T C G G T A C A G T C G T C A C G A T A T G C T A C G
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

ESR2/MA0258.2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGTTACMCTGCCATSG
AGGTCACCCTGACCT--
 A C G T T A C G A T C G A C G T A C G T T C G A A G T C T G C A T A G C A G C T A T C G G T A C A G T C G T C A C G A T A T G C T A C G
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGTTACMCTGCCATSG-
AATCGCACTGCATTCCG
 T A C G A T C G A C G T A C G T T C G A A G T C T G C A T A G C A G C T A T C G G T A C A G T C G T C A C G A T A T G C T A C G A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:GGTTACMCTGCCATSG
--------TGCCAA--
 T A C G A T C G A C G T A C G T T C G A A G T C T G C A T A G C A G C T A T C G G T A C A G T C G T C A C G A T A T G C T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

RFX5/MA0510.2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGTTACMCTGCCATSG
NGTTGCCATGGCAACG
 T A C G A T C G A C G T A C G T T C G A A G T C T G C A T A G C A G C T A T C G G T A C A G T C G T C A C G A T A T G C T A C G
A T G C C T A G A C G T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T C G A G A T C T A C G

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GGTTACMCTGCCATSG
-------CTGCCCGCA
 T A C G A T C G A C G T A C G T T C G A A G T C T G C A T A G C A G C T A T C G G T A C A G T C G T C A C G A T A T G C T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A