Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-15 | -3.618e+01 | 0.0000 | 30.0 | 4.26% | 246.3 | 0.60% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-7 | -1.705e+01 | 0.0000 | 33.0 | 4.68% | 641.3 | 1.55% | motif file (matrix) |
svg |
3 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-4 | -9.243e+00 | 0.0117 | 117.0 | 16.60% | 4875.3 | 11.78% | motif file (matrix) |
svg |
4 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-3 | -7.499e+00 | 0.0504 | 190.0 | 26.95% | 8978.5 | 21.70% | motif file (matrix) |
svg |
5 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-3 | -7.484e+00 | 0.0504 | 113.0 | 16.03% | 4896.4 | 11.83% | motif file (matrix) |
svg |
6 |
| HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer | 1e-2 | -6.730e+00 | 0.0724 | 41.0 | 5.82% | 1440.9 | 3.48% | motif file (matrix) |
svg |
7 |
| HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer | 1e-2 | -6.213e+00 | 0.1041 | 36.0 | 5.11% | 1254.0 | 3.03% | motif file (matrix) |
svg |
8 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -6.096e+00 | 0.1041 | 48.0 | 6.81% | 1821.6 | 4.40% | motif file (matrix) |
svg |
9 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-2 | -5.833e+00 | 0.1184 | 57.0 | 8.09% | 2282.4 | 5.52% | motif file (matrix) |
svg |
10 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.537e+00 | 0.1433 | 71.0 | 10.07% | 3014.7 | 7.28% | motif file (matrix) |
svg |
11 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.476e+00 | 0.1433 | 28.0 | 3.97% | 948.2 | 2.29% | motif file (matrix) |
svg |
12 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.215e+00 | 0.1649 | 59.0 | 8.37% | 2452.0 | 5.93% | motif file (matrix) |
svg |
13 |
| LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.011e+00 | 0.1865 | 5.0 | 0.71% | 68.9 | 0.17% | motif file (matrix) |
svg |
14 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-2 | -4.975e+00 | 0.1865 | 63.0 | 8.94% | 2683.5 | 6.48% | motif file (matrix) |
svg |
15 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-2 | -4.970e+00 | 0.1865 | 6.0 | 0.85% | 97.4 | 0.24% | motif file (matrix) |
svg |
16 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-2 | -4.936e+00 | 0.1865 | 32.0 | 4.54% | 1174.0 | 2.84% | motif file (matrix) |
svg |
17 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-2 | -4.878e+00 | 0.1865 | 117.0 | 16.60% | 5519.1 | 13.34% | motif file (matrix) |
svg |
18 |
| CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-2 | -4.633e+00 | 0.1967 | 4.0 | 0.57% | 48.5 | 0.12% | motif file (matrix) |
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