Information for 1-GGGAAGGVCA (Motif 4)

C T A G A T C G T C A G G T C A T C G A C T A G A C T G T A G C T A G C T C G A
Reverse Opposite:
A G C T A T C G A T C G T G A C A G T C A G C T C A G T A G T C T A G C A G T C
p-value:1e-15
log p-value:-3.474e+01
Information Content per bp:1.604
Number of Target Sequences with motif103.0
Percentage of Target Sequences with motif14.61%
Number of Background Sequences with motif2553.3
Percentage of Background Sequences with motif6.17%
Average Position of motif in Targets46.4 +/- 27.3bp
Average Position of motif in Background50.2 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GGGAAGGVCA
TGGGGAAGGGCM
 A C G T A C G T C T A G A T C G T C A G G T C A T C G A C T A G A C T G T A G C T A G C T C G A
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGGAAGGVCA--
--CAAGGHCANV
 C T A G A T C G T C A G G T C A T C G A C T A G A C T G T A G C T A G C T C G A A C G T A C G T
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGGAAGGVCA
ANGNAAAGGTCA
 A C G T A C G T C T A G A T C G T C A G G T C A T C G A C T A G A C T G T A G C T A G C T C G A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGGAAGGVCA
GGGGGGGG--
 C T A G A T C G T C A G G T C A T C G A C T A G A C T G T A G C T A G C T C G A
C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGGAAGGVCA-
---AAGGTCAC
 C T A G A T C G T C A G G T C A T C G A C T A G A C T G T A G C T A G C T C G A A C G T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGGAAGGVCA
GGGGGCGGGGC-
 A C G T A C G T C T A G A T C G T C A G G T C A T C G A C T A G A C T G T A G C T A G C T C G A
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGAAGGVCA
GGGGNGGGGC-
 A C G T C T A G A T C G T C A G G T C A T C G A C T A G A C T G T A G C T A G C T C G A
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGGAAGGVCA
TAGGGCAAAGGTCA
 A C G T A C G T A C G T A C G T C T A G A T C G T C A G G T C A T C G A C T A G A C T G T A G C T A G C T C G A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGGAAGGVCA-
-TCAAGGTCAN
 C T A G A T C G T C A G G T C A T C G A C T A G A C T G T A G C T A G C T C G A A C G T
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGGAAGGVCA-
-CAAAGGTCAG
 C T A G A T C G T C A G G T C A T C G A C T A G A C T G T A G C T A G C T C G A A C G T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G