Information for 25-TGTATGCAGTAGG (Motif 35)

A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C G T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C G T A A G T C A C G T A C T G A G T C C G T A A C G T C G T A A G T C C G T A
p-value:1e-1
log p-value:-4.081e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 20.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGTATGCAGTAGG
CCATTGTATGCAAAT--
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C G T C G T A A C T G A C T G
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGTATGCAGTAGG---
NNNANTGCAGTGCNNTT
 A C G T A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGTATGCAGTAGG----
-ATGTACAGTAGCAAAG
 A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGTATGCAGTAGG----
-ATTTACAGTAGCAAAA
 A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGTATGCAGTAGG--
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TGTATGCAGTAGG--
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TGTATGCAGTAGG
NNGCGTGTGTGCNGCN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C G T C G T A A C T G A C T G
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGTATGCAGTAGG
GHATATKCAT----
 A C G T A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C G T C G T A A C T G A C T G
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TGTATGCAGTAGG---
-CCACACAGCAGGAGA
 A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TGTATGCAGTAGG
-AGATGCAATCCC
 A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C G T C G T A A C T G A C T G
A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C