Information for 20-GCCGAGATCACTC (Motif 33)

A C T G A T G C G T A C A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G C A T T G A C
Reverse Opposite:
A C T G C G T A A C T G A C G T A C T G C G T A A C G T A G T C A C G T A G T C A C T G A T C G A G T C
p-value:1e-5
log p-value:-1.196e+01
Information Content per bp:1.913
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.0 +/- 24.7bp
Average Position of motif in Background34.2 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GCCGAGATCACTC
---AAGGTCAC--
 A C T G A T G C G T A C A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G C A T T G A C
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCCGAGATCACTC--
AAGGCGAAATCATCGCA
 A C G T A C G T A C T G A T G C G T A C A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G C A T T G A C A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCCGAGATCACTC
-CAAAGGTCAG--
 A C T G A T G C G T A C A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G C A T T G A C
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCCGAGATCACTC-----
--GAAGATCAATCACTAA
 A C T G A T G C G T A C A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G C A T T G A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

PB0144.1_Lef1_2/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCCGAGATCACTC-----
--GAAGATCAATCACTTA
 A C T G A T G C G T A C A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G C A T T G A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCCGAGATCACTC
--AGRGGTCA---
 A C T G A T G C G T A C A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G C A T T G A C
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCCGAGATCACTC
--TRAGGTCA---
 A C T G A T G C G T A C A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G C A T T G A C
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCCGAGATCACTC--
---GCGACCACACTG
 A C T G A T G C G T A C A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G C A T T G A C A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCCGAGATCACTC
-TCAAGGTCAN--
 A C T G A T G C G T A C A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G C A T T G A C
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCCGAGATCACTC
GNNACCGAGAATNNN-
 A C G T A C G T A C G T A C T G A T G C G T A C A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C G C A T T G A C
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T