Information for 13-GGGTAAGGTG (Motif 29)

A C T G C T A G A C T G A C G T C G T A G T C A A T C G A C T G A C G T A C T G
Reverse Opposite:
G T A C C G T A A G T C A T G C A C G T A C G T C G T A A G T C A G T C A G T C
p-value:1e-6
log p-value:-1.413e+01
Information Content per bp:1.888
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif41.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets54.0 +/- 28.6bp
Average Position of motif in Background54.6 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGGTAAGGTG
CAGGTAAGTAT
 A C G T A C T G C T A G A C T G A C G T C G T A G T C A A T C G A C T G A C G T A C T G
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGGTAAGGTG---
GGAGAAAGGTGCGA
 A C G T A C T G C T A G A C T G A C G T C G T A G T C A A T C G A C T G A C G T A C T G A C G T A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGGTAAGGTG
NTGGGTGTGGCC
 A C G T A C G T A C T G C T A G A C T G A C G T C G T A G T C A A T C G A C T G A C G T A C T G
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

PB0156.1_Plagl1_2/Jaspar

Match Rank:4
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GGGTAAGGTG-
GCTGGGGGGTACCCCTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G A C G T C G T A G T C A A T C G A C T G A C G T A C T G A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGGTAAGGTG-
TGGGGAAGGGCM
 A C G T A C T G C T A G A C T G A C G T C G T A G T C A A T C G A C T G A C G T A C T G A C G T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

Klf1/MA0493.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGGTAAGGTG
TGGGTGTGGCN
 A C G T A C T G C T A G A C T G A C G T C G T A G T C A A T C G A C T G A C G T A C T G
C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGGTAAGGTG-
NNVDGGGYGGGGCYN
 A C G T A C G T A C G T A C G T A C T G C T A G A C T G A C G T C G T A G T C A A T C G A C T G A C G T A C T G A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGGTAAGGTG---
-----AGGTGTCA
 A C T G C T A G A C T G A C G T C G T A G T C A A T C G A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGGTAAGGTG
TGGGTGTGGC-
 A C G T A C T G C T A G A C T G A C G T C G T A G T C A A T C G A C T G A C G T A C T G
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGGTAAGGTG-
CCGGTCACGTGA
 A C G T A C T G C T A G A C T G A C G T C G T A G T C A A T C G A C T G A C G T A C T G A C G T
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A