Information for 12-YACTGTGTRTRCWGTR (Motif 15)

A G T C C G T A A T G C G A C T C T A G A C G T A C T G G C A T C T A G A C G T C T A G G T A C C G A T T A C G G C A T C T A G
Reverse Opposite:
G A T C C G T A A G T C C G T A A C T G A G T C T C G A A G T C C G T A A G T C G T C A G A T C C T G A A T C G A C G T C T A G
p-value:1e-10
log p-value:-2.518e+01
Information Content per bp:1.697
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 28.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:forward strand
Alignment:YACTGTGTRTRCWGTR
--CTTTGT--------
 A G T C C G T A A T G C G A C T C T A G A C G T A C T G G C A T C T A G A C G T C T A G G T A C C G A T T A C G G C A T C T A G
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--YACTGTGTRTRCWGTR
GHTACAWTGTADCHR---
 A C G T A C G T A G T C C G T A A T G C G A C T C T A G A C G T A C T G G C A T C T A G A C G T C T A G G T A C C G A T T A C G G C A T C T A G
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:YACTGTGTRTRCWGTR----
---NSTGTTTRCWCAGBNNN
 A G T C C G T A A T G C G A C T C T A G A C G T A C T G G C A T C T A G A C G T C T A G G T A C C G A T T A C G G C A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--YACTGTGTRTRCWGTR
GHWACAWTGTWDCWA---
 A C G T A C G T A G T C C G T A A T G C G A C T C T A G A C G T A C T G G C A T C T A G A C G T C T A G G T A C C G A T T A C G G C A T C T A G
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A A C G T A C G T A C G T

ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----YACTGTGTRTRCWGTR-----
TGCCNACCWAGAATACTDTATCMAR
 A C G T A C G T A C G T A C G T A G T C C G T A A T G C G A C T C T A G A C G T A C T G G C A T C T A G A C G T C T A G G T A C C G A T T A C G G C A T C T A G A C G T A C G T A C G T A C G T A C G T
A G C T C A T G G A T C G T A C G A T C C T G A A T G C G A T C C G T A C T G A C T A G T G C A T G C A A C G T C G T A A G T C G A C T C G A T C G A T T C G A G A C T G A T C T G A C C G T A C T A G

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:YACTGTGTRTRCWGTR
GACAATGNN-------
 A G T C C G T A A T G C G A C T C T A G A C G T A C T G G C A T C T A G A C G T C T A G G T A C C G A T T A C G G C A T C T A G
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:YACTGTGTRTRCWGTR
-CCATTGTATGCAAAT
 A G T C C G T A A T G C G A C T C T A G A C G T A C T G G C A T C T A G A C G T C T A G G T A C C G A T T A C G G C A T C T A G
A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-YACTGTGTRTRCWGTR
NNNNTTTGTTTACNNT-
 A C G T A G T C C G T A A T G C G A C T C T A G A C G T A C T G G C A T C T A G A C G T C T A G G T A C C G A T T A C G G C A T C T A G
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-YACTGTGTRTRCWGTR
GVACAGNMTGTYCTB--
 A C G T A G T C C G T A A T G C G A C T C T A G A C G T A C T G G C A T C T A G A C G T C T A G G T A C C G A T T A C G G C A T C T A G
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:YACTGTGTRTRCWGTR
-ACAAAGGNBCCT---
 A G T C C G T A A T G C G A C T C T A G A C G T A C T G G C A T C T A G A C G T C T A G G T A C C G A T T A C G G C A T C T A G
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T