Information for 9-CACATGCTCTGTACCC (Motif 12)

A G T C G T C A A G T C C G T A A G C T A C T G A T G C A G C T A G T C A G C T A T C G A G C T C T G A A G T C G T A C G A T C
Reverse Opposite:
C T A G A C T G A C T G A G C T C T G A A T G C C T G A T C A G C T G A T A C G A G T C C T G A A C G T A C T G A C G T C T A G
p-value:1e-11
log p-value:-2.691e+01
Information Content per bp:1.756
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.2 +/- 25.2bp
Average Position of motif in Background37.7 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CACATGCTCTGTACCC
TCNCCTGCTGNGNNN--
 A C G T A G T C G T C A A G T C C G T A A G C T A C T G A T G C A G C T A G T C A G C T A T C G A G C T C T G A A G T C G T A C G A T C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CACATGCTCTGTACCC
NNTCCTGCTGTGNNN--
 A C G T A G T C G T C A A G T C C G T A A G C T A C T G A T G C A G C T A G T C A G C T A T C G A G C T C T G A A G T C G T A C G A T C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CACATGCTCTGTACCC
TNTCCTGCTGTGNNG--
 A C G T A G T C G T C A A G T C C G T A A G C T A C T G A T G C A G C T A G T C A G C T A T C G A G C T C T G A A G T C G T A C G A T C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CACATGCTCTGTACCC
AAGCACATGG---------
 A C G T A C G T A C G T A G T C G T C A A G T C C G T A A G C T A C T G A T G C A G C T A G T C A G C T A T C G A G C T C T G A A G T C G T A C G A T C
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CACATGCTCTGTACCC
--CCTGCTGAGH----
 A G T C G T C A A G T C C G T A A G C T A C T G A T G C A G C T A G T C A G C T A T C G A G C T C T G A A G T C G T A C G A T C
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CACATGCTCTGTACCC
GGTCACATGAC--------
 A C G T A C G T A C G T A G T C G T C A A G T C C G T A A G C T A C T G A T G C A G C T A G T C A G C T A T C G A G C T C T G A A G T C G T A C G A T C
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CACATGCTCTGTACCC
CCCCCTGCTGTG-----
 A C G T A G T C G T C A A G T C C G T A A G C T A C T G A T G C A G C T A G T C A G C T A T C G A G C T C T G A A G T C G T A C G A T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CACATGCTCTGTACCC
CACGTGNT--------
 A G T C G T C A A G T C C G T A A G C T A C T G A T G C A G C T A G T C A G C T A T C G A G C T C T G A A G T C G T A C G A T C
G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CACATGCTCTGTACCC
GTCACATGAY--------
 A C G T A C G T A G T C G T C A A G T C C G T A A G C T A C T G A T G C A G C T A G T C A G C T A T C G A G C T C T G A A G T C G T A C G A T C
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CACATGCTCTGTACCC
SNGCACCTGCHS-------
 A C G T A C G T A C G T A G T C G T C A A G T C C G T A A G C T A C T G A T G C A G C T A G T C A G C T A T C G A G C T C T G A A G T C G T A C G A T C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T