Information for 4-CCAHAGCGCCTTTDGA (Motif 7)

T A G C A G T C G T C A G T C A C G T A A C T G A T G C T C A G A G T C G T A C C G A T C G A T C G A T C A T G A T C G C G T A
Reverse Opposite:
C G A T A T G C G A T C G C T A G C T A C G T A A C T G C T A G A G T C A T C G A G T C A C G T C A G T A C G T A C T G A C T G
p-value:1e-11
log p-value:-2.645e+01
Information Content per bp:1.755
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.4 +/- 14.6bp
Average Position of motif in Background33.0 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCAHAGCGCCTTTDGA
GCCTCAGGGCAT-----
 A C G T T A G C A G T C G T C A G T C A C G T A A C T G A T G C T C A G A G T C G T A C C G A T C G A T C G A T C A T G A T C G C G T A
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CCAHAGCGCCTTTDGA
AAACCACAGC---------
 A C G T A C G T A C G T T A G C A G T C G T C A G T C A C G T A A C T G A T G C T C A G A G T C G T A C C G A T C G A T C G A T C A T G A T C G C G T A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CCAHAGCGCCTTTDGA
AAACCACAGAN--------
 A C G T A C G T A C G T T A G C A G T C G T C A G T C A C G T A A C T G A T G C T C A G A G T C G T A C C G A T C G A T C G A T C A T G A T C G C G T A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:4
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CCAHAGCGCCTTTDGA
--NRRGGGTCTT----
 T A G C A G T C G T C A G T C A C G T A A C T G A T G C T C A G A G T C G T A C C G A T C G A T C G A T C A T G A T C G C G T A
A C G T A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CCAHAGCGCCTTTDGA
SCCTSAGGSCAW-----
 A C G T T A G C A G T C G T C A G T C A C G T A A C T G A T G C T C A G A G T C G T A C C G A T C G A T C G A T C A T G A T C G C G T A
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:6
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CCAHAGCGCCTTTDGA
ATTCCCAAGGGAAT-----
 A C G T A C G T A C G T T A G C A G T C G T C A G T C A C G T A A C T G A T G C T C A G A G T C G T A C C G A T C G A T C G A T C A T G A T C G C G T A
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CCAHAGCGCCTTTDGA
ACAAAGGNBCCT----
 T A G C A G T C G T C A G T C A C G T A A C T G A T G C T C A G A G T C G T A C C G A T C G A T C G A T C A T G A T C G C G T A
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CCAHAGCGCCTTTDGA
-CACAGN---------
 T A G C A G T C G T C A G T C A C G T A A C T G A T G C T C A G A G T C G T A C C G A T C G A T C G A T C A T G A T C G C G T A
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----CCAHAGCGCCTTTDGA
NWAACCACADNN--------
 A C G T A C G T A C G T A C G T T A G C A G T C G T C A G T C A C G T A A C T G A T G C T C A G A G T C G T A C C G A T C G A T C G A T C A T G A T C G C G T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--CCAHAGCGCCTTTDGA
TACCATAGCAACGGT---
 A C G T A C G T T A G C A G T C G T C A G T C A C G T A A C T G A T G C T C A G A G T C G T A C C G A T C G A T C G A T C A T G A T C G C G T A
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T A C G T A C G T