Information for 3-GGRSCAYRKGTGM (Motif 5)

A C T G T C A G C T A G T A G C G T A C G T C A A G T C T C G A C A T G T A C G A C G T A C T G G T A C
Reverse Opposite:
A C T G G T A C G T C A A T G C G T A C A G C T T C A G A C G T A C T G A T C G A G T C A G T C G T A C
p-value:1e-11
log p-value:-2.691e+01
Information Content per bp:1.625
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.21%
Number of Background Sequences with motif72.8
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets56.3 +/- 22.5bp
Average Position of motif in Background51.6 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2/MA0633.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGRSCAYRKGTGM
--ACCATATGTT-
 A C T G T C A G C T A G T A G C G T A C G T C A A G T C T C G A C A T G T A C G A C G T A C T G G T A C
A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGRSCAYRKGTGM
TGGGGCAAAGGTCA
 A C G T A C T G T C A G C T A G T A G C G T A C G T C A A G T C T C G A C A T G T A C G A C G T A C T G G T A C
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGRSCAYRKGTGM
GTAGGGCAAAGGTCA
 A C G T A C G T A C T G T C A G C T A G T A G C G T A C G T C A A G T C T C G A C A T G T A C G A C G T A C T G G T A C
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PB0043.1_Max_1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGRSCAYRKGTGM---
TGACCACGTGGTCGGG
 A C T G T C A G C T A G T A G C G T A C G T C A A G T C T C G A C A T G T A C G A C G T A C T G G T A C A C G T A C G T A C G T
C A G T C A T G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T A T G C T C A G C A T G C A T G

Bhlha15/MA0607.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGRSCAYRKGTGM
---CCATATGT--
 A C T G T C A G C T A G T A G C G T A C G T C A A G T C T C G A C A T G T A C G A C G T A C T G G T A C
A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGRSCAYRKGTGM
--ANCATATGTT-
 A C T G T C A G C T A G T A G C G T A C G T C A A G T C T C G A C A T G T A C G A C G T A C T G G T A C
A C G T A C G T C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T

Myc/MA0147.2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGRSCAYRKGTGM
-AAGCACATGG--
 A C T G T C A G C T A G T A G C G T A C G T C A A G T C T C G A C A T G T A C G A C G T A C T G G T A C
A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGRSCAYRKGTGM
TAGGGCAAAGGTCA
 A C G T A C T G T C A G C T A G T A G C G T A C G T C A A G T C T C G A C A T G T A C G A C G T A C T G G T A C
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGRSCAYRKGTGM
NNACCACGTGGT-
 A C T G T C A G C T A G T A G C G T A C G T C A A G T C T C G A C A T G T A C G A C G T A C T G G T A C
C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGRSCAYRKGTGM
--GACATATGTT-
 A C T G T C A G C T A G T A G C G T A C G T C A A G T C T C G A C A T G T A C G A C G T A C T G G T A C
A C G T A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T A C G T