Motif 38

Information for 7-CTATCCACCT (Motif 38)

Reverse Opposite:

p-value:	1e-6
log p-value:	-1.437e+01
Information Content per bp:	1.708
Number of Target Sequences with motif	24.0
Percentage of Target Sequences with motif	3.79%
Number of Background Sequences with motif	549.7
Percentage of Background Sequences with motif	1.15%
Average Position of motif in Targets	52.6 +/- 30.6bp
Average Position of motif in Background	50.4 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)	0.0
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:	1
Score:	0.71
Offset:	2
Orientation:	forward strand
Alignment:	CTATCCACCT --ATCCAC--

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:	2
Score:	0.69
Offset:	2
Orientation:	reverse strand
Alignment:	CTATCCACCT-- --RYHYACCTGB

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:	3
Score:	0.69
Offset:	3
Orientation:	forward strand
Alignment:	CTATCCACCT--- ---NNCACCTGNN

SNAI2/MA0745.1/Jaspar

Match Rank:	4
Score:	0.68
Offset:	4
Orientation:	reverse strand
Alignment:	CTATCCACCT--- ----NCACCTGTN

FIGLA/MA0820.1/Jaspar

Match Rank:	5
Score:	0.67
Offset:	3
Orientation:	forward strand
Alignment:	CTATCCACCT--- ---ACCACCTGTT

ID4/MA0824.1/Jaspar

Match Rank:	6
Score:	0.65
Offset:	3
Orientation:	forward strand
Alignment:	CTATCCACCT--- ---TACACCTGTC

TCF3/MA0522.2/Jaspar

Match Rank:	7
Score:	0.65
Offset:	3
Orientation:	forward strand
Alignment:	CTATCCACCT--- ---AACACCTGCT

TCF4/MA0830.1/Jaspar

Match Rank:	8
Score:	0.64
Offset:	3
Orientation:	forward strand
Alignment:	CTATCCACCT--- ---CGCACCTGCT

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:	9
Score:	0.63
Offset:	2
Orientation:	forward strand
Alignment:	CTATCCACCT---- --SNGCACCTGCHS

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:	10
Score:	0.63
Offset:	-1
Orientation:	reverse strand
Alignment:	-CTATCCACCT- SSAATCCACANN