Information for 5-GGGAATCCTCTTC (Motif 14)

A C T G A C T G A T C G C G T A C G T A A C G T A G T C A G T C A G C T A G T C A G C T A C G T A G T C
Reverse Opposite:
A C T G C G T A C T G A A C T G C T G A A C T G A C T G G T C A C G A T A C G T A T G C A G T C A G T C
p-value:1e-9
log p-value:-2.299e+01
Information Content per bp:1.931
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.8 +/- 27.2bp
Average Position of motif in Background56.7 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFKB1/MA0105.4/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GGGAATCCTCTTC
AGGGGATTCCCCT--
 A C G T A C G T A C T G A C T G A T C G C G T A C G T A A C G T A G T C A G T C A G C T A G T C A G C T A C G T A G T C
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGGAATCCTCTTC
GGGGGAATCCCC---
 A C G T A C G T A C T G A C T G A T C G C G T A C G T A A C G T A G T C A G T C A G C T A G T C A G C T A C G T A G T C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GGGAATCCTCTTC
AGGGGAATCCCCT--
 A C G T A C G T A C T G A C T G A T C G C G T A C G T A A C G T A G T C A G T C A G C T A G T C A G C T A C G T A G T C
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGAATCCTCTTC
GGAAATCCCC---
 A C T G A C T G A T C G C G T A C G T A A C G T A G T C A G T C A G C T A G T C A G C T A C G T A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGGAATCCTCTTC
-CTAATCCTCTT-
 A C T G A C T G A T C G C G T A C G T A A C G T A G T C A G T C A G C T A G T C A G C T A C G T A G T C
A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGGAATCCTCTTC
GGGAAATCCCCN--
 A C G T A C T G A C T G A T C G C G T A C G T A A C G T A G T C A G T C A G C T A G T C A G C T A C G T A G T C
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGGAATCCTCTTC-
AGGGAAGTCATTTCT
 A C G T A C T G A C T G A T C G C G T A C G T A A C G T A G T C A G T C A G C T A G T C A G C T A C G T A G T C A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGGAATCCTCTTC
GGAAATTCCC---
 A C T G A C T G A T C G C G T A C G T A A C G T A G T C A G T C A G C T A G T C A G C T A C G T A G T C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGGAATCCTCTTC-
NTAGTTAATCCCCTTAN
 A C G T A C G T A C G T A C T G A C T G A T C G C G T A C G T A A C G T A G T C A G T C A G C T A G T C A G C T A C G T A G T C A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

PH0015.1_Crx/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGGAATCCTCTTC-
AGGCTAATCCCCAANG
 A C G T A C G T A C T G A C T G A T C G C G T A C G T A A C G T A G T C A G T C A G C T A G T C A G C T A C G T A G T C A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G