Information for 15-KARWWCACKCACWSAS (Motif 26)

A C G T C G T A C T A G C G A T C G T A A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G C G T A A T G C
Reverse Opposite:
A T C G A C G T T A G C C G A T A C T G A C G T A C T G G T A C A C T G A C G T A C T G G C A T C G T A A G T C A C G T G T C A
p-value:1e-6
log p-value:-1.491e+01
Information Content per bp:1.811
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.7 +/- 29.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:KARWWCACKCACWSAS
-----CACGCA-----
 A C G T C G T A C T A G C G A T C G T A A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:KARWWCACKCACWSAS
-----CRCCCACGCA-
 A C G T C G T A C T A G C G A T C G T A A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G C G T A A T G C
A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:KARWWCACKCACWSAS
--TBGCACGCAA----
 A C G T C G T A C T A G C G A T C G T A A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G C G T A A T G C
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:KARWWCACKCACWSAS----
----AGCGGCACACACGCAA
 A C G T C G T A C T A G C G A T C G T A A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:KARWWCACKCACWSAS
---YCCGCCCACGCN-
 A C G T C G T A C T A G C G A T C G T A A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G C G T A A T G C
A C G T A C G T A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:KARWWCACKCACWSAS----
----CGAAGCACACAAAATA
 A C G T C G T A C T A G C G A T C G T A A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:KARWWCACKCACWSAS
-RGGGCACTAACY---
 A C G T C G T A C T A G C G A T C G T A A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G C G T A A T G C
A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:KARWWCACKCACWSAS
-GGACCACCCACG---
 A C G T C G T A C T A G C G A T C G T A A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G C G T A A T G C
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:KARWWCACKCACWSAS-
--GACCACGCCCTTATT
 A C G T C G T A C T A G C G A T C G T A A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G C G T A A T G C A C G T
A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.52
Offset:6
Orientation:forward strand
Alignment:KARWWCACKCACWSAS
------AAGCACTTAA
 A C G T C G T A C T A G C G A T C G T A A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A