Information for 5-TTTTAATTCT (Motif 23)

A C G T A C G T A C G T A G C T C G T A C G T A C G A T A C G T A G T C C G A T
Reverse Opposite:
C G T A C T A G C G T A C G T A A C G T A C G T C T G A C G T A G T C A C G T A
p-value:1e-7
log p-value:-1.687e+01
Information Content per bp:1.833
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif25.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets40.9 +/- 25.2bp
Average Position of motif in Background49.0 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TTTTAATTCT
ATATTAATTAA
 A C G T A C G T A C G T A C G T A G C T C G T A C G T A C G A T A C G T A G T C C G A T
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TTTTAATTCT
ATTTGAATT--
 A C G T A C G T A C G T A C G T A G C T C G T A C G T A C G A T A C G T A G T C C G A T
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTTTAATTCT
TTTGAAACCG
 A C G T A C G T A C G T A G C T C G T A C G T A C G A T A C G T A G T C C G A T
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PH0172.1_Tlx2/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTTTAATTCT---
AANTTATTAATTAATTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A C G A T A C G T A G T C C G A T A C G T A C G T A C G T
G C A T C G T A C T A G G A C T G C A T C G T A C G A T G A C T C G T A C G T A G C A T C G A T C T G A G C T A G A C T C G A T T G C A

PB0001.1_Arid3a_1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTTTAATTCT----
NNNTTTTAATTAANNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A C G A T A C G T A G T C C G A T A C G T A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

PH0100.1_Lmx1a/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTTTAATTCT----
NNTTTTTAATTAATTCG
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A C G A T A C G T A G T C C G A T A C G T A C G T A C G T A C G T
C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G

Arid3a/MA0151.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTTTAATTCT
-TTTAAT---
 A C G T A C G T A C G T A G C T C G T A C G T A C G A T A C G T A G T C C G A T
A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T

PH0101.1_Lmx1b/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTTTAATTCT----
AGTTTTTAATTAATTTG
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A C G A T A C G T A G T C C G A T A C G T A C G T A C G T A C G T
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

PH0091.1_Lhx1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTTTAATTCT----
NNTTATTAATTAATNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A C G A T A C G T A G T C C G A T A C G T A C G T A C G T A C G T
T G A C C T G A C G A T C G A T C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T G C A T A G T C A C T G

Nkx2-5/MA0063.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTTTAATTCT
--TTAATTG-
 A C G T A C G T A C G T A G C T C G T A C G T A C G A T A C G T A G T C C G A T
A C G T A C G T C G A T A G C T C G T A C G T A A C G T G C A T C A T G A C G T