Information for 11-TGGTTTAAACCAG (Motif 22)

A C G T A C T G A C T G A C G T A C G T C G A T C T G A T C G A C G T A A G T C A G T C C G T A A T C G
Reverse Opposite:
A T G C A C G T C T A G A C T G A C G T A G C T A G C T C G T A T C G A G T C A A G T C A G T C C G T A
p-value:1e-7
log p-value:-1.775e+01
Information Content per bp:1.842
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.3 +/- 22.7bp
Average Position of motif in Background40.0 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGGTTTAAACCAG----
AACCGGTTNNAACCGGTTTN
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G A T C T G A T C G A C G T A A G T C A G T C C G T A A T C G A C G T A C G T A C G T A C G T
C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T C T A G C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T A C T G

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGTTTAAACCAG--
TGACANARRCCAGRC
 A C G T A C T G A C T G A C G T A C G T C G A T C T G A T C G A C G T A A G T C A G T C C G T A A T C G A C G T A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGGTTTAAACCAG
NNTGTGGTTT-------
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G A T C T G A T C G A C G T A A G T C A G T C C G T A A T C G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGGTTTAAACCAG
CTGTGGTTTN------
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G A T C T G A T C G A C G T A A G T C A G T C C G T A A T C G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TGGTTTAAACCAG
GCTGTGGTTT-------
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G A T C T G A T C G A C G T A A G T C A G T C C G T A A T C G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TGGTTTAAACCAG
NNHTGTGGTTWN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G A T C T G A T C G A C G T A A G T C A G T C C G T A A T C G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGGTTTAAACCAG
-TGTCTAGACG--
 A C G T A C T G A C T G A C G T A C G T C G A T C T G A T C G A C G T A A G T C A G T C C G T A A T C G
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TGGTTTAAACCAG
GTCTGTGGTTT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G A T C T G A T C G A C G T A A G T C A G T C C G T A A T C G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:TGGTTTAAACCAG---
------ATGCCAGACN
 A C G T A C T G A C T G A C G T A C G T C G A T C T G A T C G A C G T A A G T C A G T C C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:TGGTTTAAACCAG-----
-GANGTTAACTAGTTTNN
 A C G T A C T G A C T G A C G T A C G T C G A T C T G A T C G A C G T A A G T C A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C