Information for 1-TGGGAGGCCYKGTGGA (Motif 2)

A C G T A C T G C T A G T A C G C G T A C T A G T C A G G A T C A G T C A G C T C A G T A C T G A C G T A C T G A C T G C T G A
Reverse Opposite:
A G C T A G T C A G T C C G T A G T A C G T C A C T G A C T A G C A T G A G T C A G T C G A C T A G T C A G T C A G T C G T C A
p-value:1e-12
log p-value:-2.962e+01
Information Content per bp:1.755
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif19.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets42.7 +/- 22.0bp
Average Position of motif in Background55.0 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.63
Offset:11
Orientation:reverse strand
Alignment:TGGGAGGCCYKGTGGA-
-----------GTGGAT
 A C G T A C T G C T A G T A C G C G T A C T A G T C A G G A T C A G T C A G C T C A G T A C T G A C G T A C T G A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TGGGAGGCCYKGTGGA
----AGGCCTNG----
 A C G T A C T G C T A G T A C G C G T A C T A G T C A G G A T C A G T C A G C T C A G T A C T G A C G T A C T G A C T G C T G A
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TGGGAGGCCYKGTGGA
----AGGCCTAG----
 A C G T A C T G C T A G T A C G C G T A C T A G T C A G G A T C A G T C A G C T C A G T A C T G A C G T A C T G A C T G C T G A
A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.53
Offset:8
Orientation:forward strand
Alignment:TGGGAGGCCYKGTGGA----
--------NNTGTGGATTSS
 A C G T A C T G C T A G T A C G C G T A C T A G T C A G G A T C A G T C A G C T C A G T A C T G A C G T A C T G A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:TGGGAGGCCYKGTGGA-----
----------TGTGGATTNNN
 A C G T A C T G C T A G T A C G C G T A C T A G T C A G G A T C A G T C A G C T C A G T A C T G A C G T A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TGGGAGGCCYKGTGGA
CGTGGGTGGTCC------
 A C G T A C G T A C G T A C T G C T A G T A C G C G T A C T A G T C A G G A T C A G T C A G C T C A G T A C T G A C G T A C T G A C T G C T G A
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.50
Offset:5
Orientation:forward strand
Alignment:TGGGAGGCCYKGTGGA
-----NNCCACGTGG-
 A C G T A C T G C T A G T A C G C G T A C T A G T C A G G A T C A G T C A G C T C A G T A C T G A C G T A C T G A C T G C T G A
A C G T A C G T A C G T A C G T A C G T T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.50
Offset:12
Orientation:reverse strand
Alignment:TGGGAGGCCYKGTGGA---
------------TGGAAAA
 A C G T A C T G C T A G T A C G C G T A C T A G T C A G G A T C A G T C A G C T C A G T A C T G A C G T A C T G A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.49
Offset:10
Orientation:reverse strand
Alignment:TGGGAGGCCYKGTGGA----
----------NNTGGAAANN
 A C G T A C T G C T A G T A C G C G T A C T A G T C A G G A T C A G T C A G C T C A G T A C T G A C G T A C T G A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----TGGGAGGCCYKGTGGA
NNATTGACAGGTGCTT----
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G T A C G C G T A C T A G T C A G G A T C A G T C A G C T C A G T A C T G A C G T A C T G A C T G C T G A
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T A C G T A C G T A C G T A C G T