Information for 9-TTCAGCAGBGGCCCCC (Motif 16)

C G A T A G C T A G T C C G T A A C T G A T G C T G C A T A C G A G T C C A T G A C T G A G T C A G T C G A T C A G T C A G T C
Reverse Opposite:
T C A G T A C G C A T G A C T G T A C G G T A C G T A C T A C G A T G C A C G T A T C G G T A C C G A T T A C G T C G A G C T A
p-value:1e-8
log p-value:-2.007e+01
Information Content per bp:1.657
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.43%
Number of Background Sequences with motif151.1
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets52.7 +/- 20.5bp
Average Position of motif in Background52.5 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTCAGCAGBGGCCCCC-
CTCAGCAGCTGCTACTG
 C G A T A G C T A G T C C G T A A C T G A T G C T G C A T A C G A G T C C A T G A C T G A G T C A G T C G A T C A G T C A G T C A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTCAGCAGBGGCCCCC
DCHCAGCAGGRGGCC--
 A C G T C G A T A G C T A G T C C G T A A C T G A T G C T G C A T A C G A G T C C A T G A C T G A G T C A G T C G A T C A G T C A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTCAGCAGBGGCCCCC
TGAGTCAGCA---------
 A C G T A C G T A C G T C G A T A G C T A G T C C G T A A C T G A T G C T G C A T A C G A G T C C A T G A C T G A G T C A G T C G A T C A G T C A G T C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTCAGCAGBGGCCCCC
CACAGCAGGGGG----
 C G A T A G C T A G T C C G T A A C T G A T G C T G C A T A C G A G T C C A T G A C T G A G T C A G T C G A T C A G T C A G T C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTCAGCAGBGGCCCCC
--SDGCAGGTGCNS--
 C G A T A G C T A G T C C G T A A C T G A T G C T G C A T A C G A G T C C A T G A C T G A G T C A G T C G A T C A G T C A G T C
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTCAGCAGBGGCCCCC
---AGCAGCTGCT---
 C G A T A G C T A G T C C G T A A C T G A T G C T G C A T A C G A G T C C A T G A C T G A G T C A G T C G A T C A G T C A G T C
A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCAGCAGBGGCCCCC
GTCAGCANNTN-----
 C G A T A G C T A G T C C G T A A C T G A T G C T G C A T A C G A G T C C A T G A C T G A G T C A G T C G A T C A G T C A G T C
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TTCAGCAGBGGCCCCC----
----NNNGGGGCGCCCCCNN
 C G A T A G C T A G T C C G T A A C T G A T G C T G C A T A C G A G T C C A T G A C T G A G T C A G T C G A T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTCAGCAGBGGCCCCC
-NNAGCAGCTGCT---
 C G A T A G C T A G T C C G T A A C T G A T G C T G C A T A C G A G T C C A T G A C T G A G T C A G T C G A T C A G T C A G T C
A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTCAGCAGBGGCCCCC
--CAGCAGCTGN----
 C G A T A G C T A G T C C G T A A C T G A T G C T G C A T A C G A G T C C A T G A C T G A G T C A G T C G A T C A G T C A G T C
A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T