Information for 1-TCACACTGTG (Motif 2)

A G C T G A T C G T C A T G A C G T C A T A G C G A C T T A C G G A C T A T C G
Reverse Opposite:
T A G C C T G A A T G C C T G A A T C G A C G T A C T G C A G T C T A G T C G A
p-value:1e-12
log p-value:-2.848e+01
Information Content per bp:1.651
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif13.12%
Number of Background Sequences with motif2408.6
Percentage of Background Sequences with motif5.06%
Average Position of motif in Targets45.5 +/- 28.1bp
Average Position of motif in Background50.6 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TCACACTGTG---
NNTCCTGCTGTGNNN
 A C G T A C G T A G C T G A T C G T C A T G A C G T C A T A G C G A C T T A C G G A C T A T C G A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

TBX21/MA0690.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCACACTGTG
TTCACACCTT-
 A C G T A G C T G A T C G T C A T G A C G T C A T A G C G A C T T A C G G A C T A T C G
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TCACACTGTG
NTTTTCACACCTT-
 A C G T A C G T A C G T A C G T A G C T G A T C G T C A T G A C G T C A T A G C G A C T T A C G G A C T A T C G
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCACACTGTG---
TNTCCTGCTGTGNNG
 A C G T A C G T A G C T G A T C G T C A T G A C G T C A T A G C G A C T T A C G G A C T A T C G A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCACACTGTG-
-CCTGCTGAGH
 A G C T G A T C G T C A T G A C G T C A T A G C G A C T T A C G G A C T A T C G A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCACACTGTG---
TCNCCTGCTGNGNNN
 A C G T A C G T A G C T G A T C G T C A T G A C G T C A T A G C G A C T T A C G G A C T A T C G A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

MGA/MA0801.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCACACTGTG
TCACACCT--
 A G C T G A T C G T C A T G A C G T C A T A G C G A C T T A C G G A C T A T C G
G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TCACACTGTG
----GCTGTG
 A G C T G A T C G T C A T G A C G T C A T A G C G A C T T A C G G A C T A T C G
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCACACTGTG
TCACACCT--
 A G C T G A T C G T C A T G A C G T C A T A G C G A C T T A C G G A C T A T C G
A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCACACTGTG----
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T A G C T G A T C G T C A T G A C G T C A T A G C G A C T T A C G G A C T A T C G A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T