Information for 4-CCAGCGTGTGCACACG (Motif 11)

A T G C G T A C G T C A C A T G A T G C A C T G A G C T A T C G C G A T A C T G A G T C C G T A A G T C C G T A A T G C A C T G
Reverse Opposite:
T G A C A T C G A C G T A C T G C G A T A C T G A G T C C G T A A T G C C T G A A G T C A T C G G A T C C A G T A C T G T A C G
p-value:1e-9
log p-value:-2.110e+01
Information Content per bp:1.783
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 15.4bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:CCAGCGTGTGCACACG----
----NNTTTGCACACGGCCC
 A T G C G T A C G T C A C A T G A T G C A C T G A G C T A T C G C G A T A C T G A G T C C G T A A G T C C G T A A T G C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CCAGCGTGTGCACACG--
-NTNTATGTGCACATNNN
 A T G C G T A C G T C A C A T G A T G C A C T G A G C T A T C G C G A T A C T G A G T C C G T A A G T C C G T A A T G C A C T G A C G T A C G T
A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

MTF1/MA0863.1/Jaspar

Match Rank:3
Score:0.68
Offset:6
Orientation:forward strand
Alignment:CCAGCGTGTGCACACG----
------TTTGCACACGGCAC
 A T G C G T A C G T C A C A T G A T G C A C T G A G C T A T C G C G A T A C T G A G T C C G T A A G T C C G T A A T G C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCAGCGTGTGCACACG--
-NNGTATGTGCACATNNN
 A T G C G T A C G T C A C A T G A T G C A C T G A G C T A T C G C G A T A C T G A G T C C G T A A G T C C G T A A T G C A C T G A C G T A C G T
A C G T C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

NRF1/MA0506.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCAGCGTGTGCACACG
---GCGCCTGCGCA--
 A T G C G T A C G T C A C A T G A T G C A C T G A G C T A T C G C G A T A C T G A G T C C G T A A G T C C G T A A T G C A C T G
A C G T A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCAGCGTGTGCACACG
CCATTGTATGCAAAT-
 A T G C G T A C G T C A C A T G A T G C A C T G A G C T A T C G C G A T A C T G A G T C C G T A A G T C C G T A A T G C A C T G
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCAGCGTGTGCACACG---
--NSTGTTTRCWCAGBNNN
 A T G C G T A C G T C A C A T G A T G C A C T G A G C T A T C G C G A T A C T G A G T C C G T A A G T C C G T A A T G C A C T G A C G T A C G T A C G T
A C G T A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CCAGCGTGTGCACACG
---GCGCATGCGCAG-
 A T G C G T A C G T C A C A T G A T G C A C T G A G C T A T C G C G A T A C T G A G T C C G T A A G T C C G T A A T G C A C T G
A C G T A C G T A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T

NRF(NRF)/Promoter/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCAGCGTGTGCACACG
---GCGCATGCGCAC-
 A T G C G T A C G T C A C A T G A T G C A C T G A G C T A T C G C G A T A C T G A G T C C G T A A G T C C G T A A T G C A C T G
A C G T A C G T A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CCAGCGTGTGCACACG---
---GGGTGTGCCCAAAAGG
 A T G C G T A C G T C A C A T G A T G C A C T G A G C T A T C G C G A T A C T G A G T C C G T A A G T C C G T A A T G C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G