Information for 2-CAGGGCACTGGGR (Motif 6)

A G T C C G T A C A T G C T A G A C T G T A G C G C T A A G T C G A C T A C T G A C T G A C T G C T A G
Reverse Opposite:
G A T C T G A C T G A C A G T C C T G A A C T G C G A T A T C G G T A C A G T C G T A C C G A T A C T G
p-value:1e-9
log p-value:-2.264e+01
Information Content per bp:1.748
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.39%
Number of Background Sequences with motif242.0
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets45.3 +/- 24.5bp
Average Position of motif in Background52.2 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAGGGCACTGGGR
WDNCTGGGCA------
 A C G T A C G T A C G T A G T C C G T A C A T G C T A G A C T G T A G C G C T A A G T C G A C T A C T G A C T G A C T G C T A G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAGGGCACTGGGR--
GTAGGTCACTGGGTCA
 A C G T A G T C C G T A C A T G C T A G A C T G T A G C G C T A A G T C G A C T A C T G A C T G A C T G C T A G A C G T A C G T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CAGGGCACTGGGR
------GCTGTG-
 A G T C C G T A C A T G C T A G A C T G T A G C G C T A A G T C G A C T A C T G A C T G A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAGGGCACTGGGR-
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A G T C C G T A C A T G C T A G A C T G T A G C G C T A A G T C G A C T A C T G A C T G A C T G C T A G A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:5
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----CAGGGCACTGGGR---
NTTMRCACNNNVSTGYKAANT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C A T G C T A G A C T G T A G C G C T A A G T C G A C T A C T G A C T G A C T G C T A G A C G T A C G T A C G T
G C A T A G C T G A C T T G C A C T G A T A G C C T G A A T G C G A T C A G C T T G C A T C A G A T C G G A C T T A C G G A C T A C T G C T G A C T G A G C T A G C A T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CAGGGCACTGGGR
TCCCCTGGGGAC-----
 A C G T A C G T A C G T A C G T A G T C C G T A C A T G C T A G A C T G T A G C G C T A A G T C G A C T A C T G A C T G A C T G C T A G
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CAGGGCACTGGGR
NRRGGGTCTT---
 A G T C C G T A C A T G C T A G A C T G T A G C G C T A A G T C G A C T A C T G A C T G A C T G C T A G
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CAGGGCACTGGGR
TGTCAGGGGGCG----
 A C G T A C G T A C G T A G T C C G T A C A T G C T A G A C T G T A G C G C T A A G T C G A C T A C T G A C T G A C T G C T A G
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CAGGGCACTGGGR
VCAGGTRDRY----
 A C G T A G T C C G T A C A T G C T A G A C T G T A G C G C T A A G T C G A C T A C T G A C T G A C T G C T A G
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGCACTGGGR
NNCAGGTGNN-----
 A C G T A C G T A G T C C G T A C A T G C T A G A C T G T A G C G C T A A G T C G A C T A C T G A C T G A C T G C T A G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T