Information for 3-GCTTCTCAAGCAGGVM (Motif 3)

C T A G G T A C A G C T A C G T A G T C G C A T T A G C G T C A G C T A C A T G A G T C C T G A T A C G C T A G T C G A G T C A
Reverse Opposite:
C A G T A C G T A G T C A G T C A G C T A C T G G A T C C G A T A C G T A C T G C G T A A C T G G T C A C T G A C A T G A G T C
p-value:1e-12
log p-value:-2.806e+01
Information Content per bp:1.700
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.32%
Number of Background Sequences with motif60.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets41.7 +/- 25.1bp
Average Position of motif in Background49.5 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCTTCTCAAGCAGGVM
GCTTCC----------
 C T A G G T A C A G C T A C G T A G T C G C A T T A G C G T C A G C T A C A T G A G T C C T G A T A C G C T A G T C G A G T C A
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCTTCTCAAGCAGGVM
ANTTCTCAGGAANNN-
 C T A G G T A C A G C T A C G T A G T C G C A T T A G C G T C A G C T A C A T G A G T C C T G A T A C G C T A G T C G A G T C A
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTTCTCAAGCAGGVM
ANTTCTNNAGAA----
 C T A G G T A C A G C T A C G T A G T C G C A T T A G C G T C A G C T A C A T G A G T C C T G A T A C G C T A G T C G A G T C A
C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A A C G T A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:4
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCTTCTCAAGCAGGVM
--TTCTNMGGAA----
 C T A G G T A C A G C T A C G T A G T C G C A T T A G C G T C A G C T A C A T G A G T C C T G A T A C G C T A G T C G A G T C A
A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCTTCTCAAGCAGGVM
HTTTCCCASG------
 C T A G G T A C A G C T A C G T A G T C G C A T T A G C G T C A G C T A C A T G A G T C C T G A T A C G C T A G T C G A G T C A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCTTCTCAAGCAGGVM
AGCCACTCAAG------
 A C G T C T A G G T A C A G C T A C G T A G T C G C A T T A G C G T C A G C T A C A T G A G T C C T G A T A C G C T A G T C G A G T C A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GCTTCTCAAGCAGGVM
---TBGCACGCAA---
 C T A G G T A C A G C T A C G T A G T C G C A T T A G C G T C A G C T A C A T G A G T C C T G A T A C G C T A G T C G A G T C A
A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GCTTCTCAAGCAGGVM
GSCTGTCACTCA----
 C T A G G T A C A G C T A C G T A G T C G C A T T A G C G T C A G C T A C A T G A G T C C T G A T A C G C T A G T C G A G T C A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GCTTCTCAAGCAGGVM-
-----CACAGCAGGGGG
 C T A G G T A C A G C T A C G T A G T C G C A T T A G C G T C A G C T A C A T G A G T C C T G A T A C G C T A G T C G A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.48
Offset:5
Orientation:forward strand
Alignment:GCTTCTCAAGCAGGVM
-----CCAATCAA---
 C T A G G T A C A G C T A C G T A G T C G C A T T A G C G T C A G C T A C A T G A G T C C T G A T A C G C T A G T C G A G T C A
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T