Information for 6-VCMTGRCCMRVKGCCC (Motif 11)

T A C G A G T C G T A C A G C T A C T G C T A G A T G C G T A C G T C A T C G A T A G C A C T G C T A G A T G C G T A C A G T C
Reverse Opposite:
C T A G A C T G A T C G A G T C T G A C A T C G A G C T A C G T C A T G T A C G G A T C T G A C C T G A A C T G C T A G A T G C
p-value:1e-8
log p-value:-2.007e+01
Information Content per bp:1.575
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif3.21%
Number of Background Sequences with motif252.6
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets56.3 +/- 22.3bp
Average Position of motif in Background50.5 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:VCMTGRCCMRVKGCCC-
-CTTGGCANNNTGCCAA
 T A C G A G T C G T A C A G C T A C T G C T A G A T G C G T A C G T C A T C G A T A G C A C T G C T A G A T G C G T A C A G T C A C G T
A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:VCMTGRCCMRVKGCCC---
---TGACCCAGTGACCTAC
 T A C G A G T C G T A C A G C T A C T G C T A G A T G C G T A C G T C A T C G A T A G C A C T G C T A G A T G C G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:3
Score:0.52
Offset:9
Orientation:forward strand
Alignment:VCMTGRCCMRVKGCCC---
---------AAGACCCYYN
 T A C G A G T C G T A C A G C T A C T G C T A G A T G C G T A C G T C A T C G A T A G C A C T G C T A G A T G C G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--VCMTGRCCMRVKGCCC--
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T T A C G A G T C G T A C A G C T A C T G C T A G A T G C G T A C G T C A T C G A T A G C A C T G C T A G A T G C G T A C A G T C A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.50
Offset:10
Orientation:forward strand
Alignment:VCMTGRCCMRVKGCCC---
----------CTGCCCGCA
 T A C G A G T C G T A C A G C T A C T G C T A G A T G C G T A C G T C A T C G A T A G C A C T G C T A G A T G C G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:6
Score:0.50
Offset:3
Orientation:forward strand
Alignment:VCMTGRCCMRVKGCCC-
---TGGCACCATGCCAA
 T A C G A G T C G T A C A G C T A C T G C T A G A T G C G T A C G T C A T C G A T A G C A C T G C T A G A T G C G T A C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:VCMTGRCCMRVKGCCC
--CTGGCAGNCTGCCA
 T A C G A G T C G T A C A G C T A C T G C T A G A T G C G T A C G T C A T C G A T A G C A C T G C T A G A T G C G T A C A G T C
A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.50
Offset:10
Orientation:forward strand
Alignment:VCMTGRCCMRVKGCCC---
----------ATGCCCACC
 T A C G A G T C G T A C A G C T A C T G C T A G A T G C G T A C G T C A T C G A T A G C A C T G C T A G A T G C G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.47
Offset:6
Orientation:forward strand
Alignment:VCMTGRCCMRVKGCCC------
------GGGTGTGCCCAAAAGG
 T A C G A G T C G T A C A G C T A C T G C T A G A T G C G T A C G T C A T C G A T A G C A C T G C T A G A T G C G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

MTF1/MA0863.1/Jaspar

Match Rank:10
Score:0.46
Offset:2
Orientation:forward strand
Alignment:VCMTGRCCMRVKGCCC
--TTTGCACACGGCAC
 T A C G A G T C G T A C A G C T A C T G C T A G A T G C G T A C G T C A T C G A T A G C A C T G C T A G A T G C G T A C A G T C
A C G T A C G T C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C