Information for 2-GGAGAGGGCA (Motif 10)

A C T G A C T G C G T A A C T G G T C A A C T G T A C G A T C G A T G C C G T A
Reverse Opposite:
C G A T T A C G T A G C A T G C G T A C A C G T A G T C C G A T G T A C A G T C
p-value:1e-8
log p-value:-2.017e+01
Information Content per bp:1.757
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif4.64%
Number of Background Sequences with motif534.0
Percentage of Background Sequences with motif1.10%
Average Position of motif in Targets59.8 +/- 25.1bp
Average Position of motif in Background50.9 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGAGAGGGCA
CGGAGC-----
 A C G T A C T G A C T G C G T A A C T G G T C A A C T G T A C G A T C G A T G C C G T A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGAGAGGGCA
GGGGGGGG--
 A C T G A C T G C G T A A C T G G T C A A C T G T A C G A T C G A T G C C G T A
C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGAGAGGGCA
--AGRGGTCA
 A C T G A C T G C G T A A C T G G T C A A C T G T A C G A T C G A T G C C G T A
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGAGAGGGCA-----
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C T G A C T G C G T A A C T G G T C A A C T G T A C G A T C G A T G C C G T A A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGAGAGGGCA
TAGGGCAAAGGTCA
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G G T C A A C T G T A C G A T C G A T G C C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGAGGGCA-
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G G T C A A C T G T A C G A T C G A T G C C G T A A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGAGAGGGCA
--TRAGGTCA
 A C T G A C T G C G T A A C T G G T C A A C T G T A C G A T C G A T G C C G T A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGAGAGGGCA
GTGGGGGAGGGG-
 A C G T A C G T A C G T A C T G A C T G C G T A A C T G G T C A A C T G T A C G A T C G A T G C C G T A
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GGAGAGGGCA
GTAGGGCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G G T C A A C T G T A C G A T C G A T G C C G T A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGAGAGGGCA-
--NGTGGGCAT
 A C T G A C T G C G T A A C T G G T C A A C T G T A C G A T C G A T G C C G T A A C G T
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T