Information for 1-TCCACTTGGCAWGTGA (Motif 1)

A G C T A G T C G A T C G C T A A T G C A C G T C A G T A C T G A C T G A G T C C G T A C G A T A C T G G A C T C A T G G C T A
Reverse Opposite:
C G A T G T A C C T G A A G T C C G T A A C G T A C T G A G T C G T A C G C T A C G T A A T C G C A G T C A T G C T A G C T G A
p-value:1e-12
log p-value:-2.856e+01
Information Content per bp:1.750
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.6 +/- 15.8bp
Average Position of motif in Background20.9 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TCCACTTGGCAWGTGA
---NNTTGGCANN---
 A G C T A G T C G A T C G C T A A T G C A C G T C A G T A C T G A C T G A G T C C G T A C G A T A C T G G A C T C A T G G C T A
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TCCACTTGGCAWGTGA
----NTTGGCANN---
 A G C T A G T C G A T C G C T A A T G C A C G T C A G T A C T G A C T G A G T C C G T A C G A T A C T G G A C T C A T G G C T A
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TCCACTTGGCAWGTGA
----CTTGGCAA----
 A G C T A G T C G A T C G C T A A T G C A C G T C A G T A C T G A C T G A G T C C G T A C G A T A C T G G A C T C A T G G C T A
A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TCCACTTGGCAWGTGA
---NGTGGGCAT----
 A G C T A G T C G A T C G C T A A T G C A C G T C A G T A C T G A C T G A G T C C G T A C G A T A C T G G A C T C A T G G C T A
A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TCCACTTGGCAWGTGA
-----AAGGCAAGTGT
 A G C T A G T C G A T C G C T A A T G C A C G T C A G T A C T G A C T G A G T C C G T A C G A T A C T G G A C T C A T G G C T A
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TCCACTTGGCAWGTGA
---GGTTGGCAT----
 A G C T A G T C G A T C G C T A A T G C A C G T C A G T A C T G A C T G A G T C C G T A C G A T A C T G G A C T C A T G G C T A
A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TCCACTTGGCAWGTGA
-----TTGGCA-----
 A G C T A G T C G A T C G C T A A T G C A C G T C A G T A C T G A C T G A G T C C G T A C G A T A C T G G A C T C A T G G C T A
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCCACTTGGCAWGTGA
-WDNCTGGGCA-----
 A G C T A G T C G A T C G C T A A T G C A C G T C A G T A C T G A C T G A G T C C G T A C G A T A C T G G A C T C A T G G C T A
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:9
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TCCACTTGGCAWGTGA--
-------GTCATGTGACC
 A G C T A G T C G A T C G C T A A T G C A C G T C A G T A C T G A C T G A G T C C G T A C G A T A C T G G A C T C A T G G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

PB0147.1_Max_2/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TCCACTTGGCAWGTGA---
-----GTGCCACGCGACTG
 A G C T A G T C G A T C G C T A A T G C A C G T C A G T A C T G A C T G A G T C C G T A C G A T A C T G G A C T C A T G G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G