Information for 5-AAAAGGAAACTGA (Motif 6)

C G T A C G T A C G T A C G T A A C T G A C T G G T C A C G T A C G T A A G T C C G A T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C T G A C G T A C G T A C G T G T A C G T A C A C G T A C G T A C G T A C G T
p-value:1e-13
log p-value:-3.123e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 29.4bp
Average Position of motif in Background54.7 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:1
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--AAAAGGAAACTGA
GGAAANTGAAACTNA
 A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G G T C A C G T A C G T A A G T C C G A T A C T G C G T A
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PB0033.1_Irf3_1/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--AAAAGGAAACTGA
GAGAACCGAAACTG-
 A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G G T C A C G T A C G T A A G T C C G A T A C T G C G T A
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--AAAAGGAAACTGA
CAAAATCGAAACTAA
 A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G G T C A C G T A C G T A A G T C C G A T A C T G C G T A
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AAAAGGAAACTGA
GAAAMTGAAACT--
 A C G T C G T A C G T A C G T A C G T A A C T G A C T G G T C A C G T A C G T A A G T C C G A T A C T G C G T A
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AAAAGGAAACTGA
GAAACTGAAACT--
 A C G T C G T A C G T A C G T A C G T A A C T G A C T G G T C A C G T A C G T A A G T C C G A T A C T G C G T A
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AAAAGGAAACTGA
GAAASYGAAASY--
 A C G T C G T A C G T A C G T A C G T A A C T G A C T G G T C A C G T A C G T A A G T C C G A T A C T G C G T A
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAAAGGAAACTGA--------
AAANNGAAAGTGAAAGTAAAN
 C G T A C G T A C G T A C G T A A C T G A C T G G T C A C G T A C G T A A G T C C G A T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAAAGGAAACTGA
GAAAGTGAAAGT--
 A C G T C G T A C G T A C G T A C G T A A C T G A C T G G T C A C G T A C G T A A G T C C G A T A C T G C G T A
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AAAAGGAAACTGA
ACGAAAGCGAAAGT--
 A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G G T C A C G T A C G T A A G T C C G A T A C T G C G T A
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAAAGGAAACTGA-
CAAAAGTAAACAAAG
 A C G T C G T A C G T A C G T A C G T A A C T G A C T G G T C A C G T A C G T A A G T C C G A T A C T G C G T A A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G