Information for 10-GCTTTATATGGCT (Motif 13)

T C A G A G T C A C G T A C G T A C G T G T C A A C G T C G T A A C G T C T A G A T C G A T G C C G A T
Reverse Opposite:
C G T A A T C G A T G C A G T C C G T A C G A T C G T A A C G T C G T A C G T A C G T A C T A G A G T C
p-value:1e-8
log p-value:-2.055e+01
Information Content per bp:1.838
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.3 +/- 26.2bp
Average Position of motif in Background62.5 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0008.1_MADS_class/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GCTTTATATGGCT
-CCATATATGG--
 T C A G A G T C A C G T A C G T A C G T G T C A A C G T C G T A A C G T C T A G A T C G A T G C C G A T
A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTATATGGCT
TNCCATATATGG--
 A C G T T C A G A G T C A C G T A C G T A C G T G T C A A C G T C G T A A C G T C T A G A T C G A T G C C G A T
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCTTTATATGGCT
GCTATTTTTGGM-
 T C A G A G T C A C G T A C G T A C G T G T C A A C G T C G T A A C G T C T A G A T C G A T G C C G A T
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTATATGGCT
TNCCATATATGGNA
 A C G T T C A G A G T C A C G T A C G T A C G T G T C A A C G T C G T A A C G T C T A G A T C G A T G C C G A T
C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCTTTATATGGCT
GCTATTTTTAGC-
 T C A G A G T C A C G T A C G T A C G T G T C A A C G T C G T A A C G T C T A G A T C G A T G C C G A T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTATATGGCT--
NGANTTTTATGGCTCN
 A C G T T C A G A G T C A C G T A C G T A C G T G T C A A C G T C G T A A C G T C T A G A T C G A T G C C G A T A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

CDX2/MA0465.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GCTTTATATGGCT-
---TTTTATGGCTN
 T C A G A G T C A C G T A C G T A C G T G T C A A C G T C G T A A C G T C T A G A T C G A T G C C G A T A C G T
A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GCTTTATATGGCT
NNNNNNCTTTTATAN--
 A C G T A C G T A C G T A C G T T C A G A G T C A C G T A C G T A C G T G T C A A C G T C G T A A C G T C T A G A T C G A T G C C G A T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GCTTTATATGGCT
NNNNNNCTTTTATAN--
 A C G T A C G T A C G T A C G T T C A G A G T C A C G T A C G T A C G T G T C A A C G T C G T A A C G T C T A G A T C G A T G C C G A T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCTTTATATGGCT
GCTATTTATAGC-
 T C A G A G T C A C G T A C G T A C G T G T C A A C G T C G T A A C G T C T A G A T C G A T G C C G A T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T