Information for 9-CARAMAAATKAAT (Motif 12)

A T G C C T G A C T A G G C T A T G C A C G T A G C T A T C G A C A G T A C G T C T G A T C G A C A G T
Reverse Opposite:
G T C A A G C T G A C T G T C A G C T A A G C T C G A T A C G T A C G T C A G T G A T C A G C T T A C G
p-value:1e-9
log p-value:-2.283e+01
Information Content per bp:1.660
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets64.7 +/- 24.3bp
Average Position of motif in Background67.1 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CARAMAAATKAAT
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A T G C C T G A C T A G G C T A T G C A C G T A G C T A T C G A C A G T A C G T C T G A T C G A C A G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CARAMAAATKAAT---
-----ATATTAATTAA
 A T G C C T G A C T A G G C T A T G C A C G T A G C T A T C G A C A G T A C G T C T G A T C G A C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

ONECUT3/MA0757.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CARAMAAATKAAT---
--AAAAAATCAATAAT
 A T G C C T G A C T A G G C T A T G C A C G T A G C T A T C G A C A G T A C G T C T G A T C G A C A G T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

Lhx3/MA0135.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CARAMAAATKAAT--
--GATTAATTAATTT
 A T G C C T G A C T A G G C T A T G C A C G T A G C T A T C G A C A G T A C G T C T G A T C G A C A G T A C G T A C G T
A C G T A C G T T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T

PH0108.1_Msx3/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CARAMAAATKAAT--
CAAAACCAATTAATTT
 A C G T A T G C C T G A C T A G G C T A T G C A C G T A G C T A T C G A C A G T A C G T C T G A T C G A C A G T A C G T A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PH0006.1_Barhl2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CARAMAAATKAAT--
AAAAACCAATTAAGAA
 A C G T A T G C C T G A C T A G G C T A T G C A C G T A G C T A T C G A C A G T A C G T C T G A T C G A C A G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PH0028.1_En1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CARAMAAATKAAT--
GCGAACTAATTAATGC
 A C G T A T G C C T G A C T A G G C T A T G C A C G T A G C T A T C G A C A G T A C G T C T G A T C G A C A G T A C G T A C G T
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CARAMAAATKAAT
---AAAAGTCAA-
 A T G C C T G A C T A G G C T A T G C A C G T A G C T A T C G A C A G T A C G T C T G A T C G A C A G T
A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

PH0120.1_Nkx6-3/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CARAMAAATKAAT----
CNNANTAATTAATTNNC
 A T G C C T G A C T A G G C T A T G C A C G T A G C T A T C G A C A G T A C G T C T G A T C G A C A G T A C G T A C G T A C G T A C G T
T G A C T C G A T G C A T C G A A C T G G A C T T G C A C G T A G A C T G A C T C T G A G C T A C G A T C G A T C G A T A C G T G A T C

Mecom/MA0029.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CARAMAAATKAAT-
AAGATAAGATAACA
 A T G C C T G A C T A G G C T A T G C A C G T A G C T A T C G A C A G T A C G T C T G A T C G A C A G T A C G T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A