Information for 3-GACCTTTSAGGTTCTT (Motif 7)

C A T G C T G A A G T C G T A C C G A T A C G T A C G T A T G C C G T A C A T G C T A G A C G T A G C T A G T C A C G T C G A T
Reverse Opposite:
C G T A C G T A A C T G C T G A T G C A A G T C G T A C C G A T T A C G T G C A G T C A C G T A A C T G T A C G A G C T G A T C
p-value:1e-13
log p-value:-3.089e+01
Information Content per bp:1.778
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.3 +/- 27.1bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GACCTTTSAGGTTCTT
TGACCTTTCGTGACCTT
 A C G T C A T G C T G A A G T C G T A C C G A T A C G T A C G T A T G C C G T A C A T G C T A G A C G T A G C T A G T C A C G T C G A T
A G C T C T A G C G T A T G A C G T A C A G C T A G C T A G C T T A G C C A T G A G C T A C T G T G C A G T A C T A G C A G C T G A C T

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GACCTTTSAGGTTCTT
NNNGTGACCTTTGNNN-----
 A C G T A C G T A C G T A C G T A C G T C A T G C T G A A G T C G T A C C G A T A C G T A C G T A T G C C G T A C A T G C T A G A C G T A G C T A G T C A C G T C G A T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A A C G T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GACCTTTSAGGTTCTT
NNNNTGACCTTTNNNN-----
 A C G T A C G T A C G T A C G T A C G T C A T G C T G A A G T C G T A C C G A T A C G T A C G T A T G C C G T A C A T G C T A G A C G T A G C T A G T C A C G T C G A T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A A C G T A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GACCTTTSAGGTTCTT
TGACCTTTNCNT-----
 A C G T C A T G C T G A A G T C G T A C C G A T A C G T A C G T A T G C C G T A C A T G C T A G A C G T A G C T A G T C A C G T C G A T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GACCTTTSAGGTTCTT
CTGACCTTTG--------
 A C G T A C G T C A T G C T G A A G T C G T A C C G A T A C G T A C G T A T G C C G T A C A T G C T A G A C G T A G C T A G T C A C G T C G A T
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GACCTTTSAGGTTCTT
TGACCTTTGACCTN---
 A C G T C A T G C T G A A G T C G T A C C G A T A C G T A C G T A T G C C G T A C A T G C T A G A C G T A G C T A G T C A C G T C G A T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------GACCTTTSAGGTTCTT
NNNNATGACCTTGANTN-----
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T G A A G T C G T A C C G A T A C G T A C G T A T G C C G T A C A T G C T A G A C G T A G C T A G T C A C G T C G A T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T A C G T A C G T A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GACCTTTSAGGTTCTT-
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T C A T G C T G A A G T C G T A C C G A T A C G T A C G T A T G C C G T A C A T G C T A G A C G T A G C T A G T C A C G T C G A T A C G T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GACCTTTSAGGTTCTT
NTGACCTTGA--------
 A C G T A C G T C A T G C T G A A G T C G T A C C G A T A C G T A C G T A T G C C G T A C A T G C T A G A C G T A G C T A G T C A C G T C G A T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GACCTTTSAGGTTCTT
TGACCTTTGACCCC---
 A C G T C A T G C T G A A G T C G T A C C G A T A C G T A C G T A T G C C G T A C A T G C T A G A C G T A G C T A G T C A C G T C G A T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T A C G T