Information for 20-GWCCTCTGTGACA (Motif 31)

A C T G G C A T T A G C A G T C C G A T A G T C C G A T A T C G C A G T T A C G G C T A A T G C C G T A
Reverse Opposite:
A C G T T A C G C G A T A G T C G T C A A T G C C G T A C T A G C G T A C T A G A C T G C G T A G T A C
p-value:1e-8
log p-value:-1.904e+01
Information Content per bp:1.696
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif29.5
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets49.0 +/- 25.4bp
Average Position of motif in Background48.0 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)-1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GWCCTCTGTGACA
TGACCTTTGCCCCA
 A C G T A C T G G C A T T A G C A G T C C G A T A G T C C G A T A T C G C A G T T A C G G C T A A T G C C G T A
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GWCCTCTGTGACA-
TGACCTTTGCCCTAN
 A C G T A C T G G C A T T A G C A G T C C G A T A G T C C G A T A T C G C A G T T A C G G C T A A T G C C G T A A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GWCCTCTGTGACA
CTGACCTTTG-----
 A C G T A C G T A C T G G C A T T A G C A G T C C G A T A G T C C G A T A T C G C A G T T A C G G C T A A T G C C G T A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GWCCTCTGTGACA
TGACCTTTGCCCTA
 A C G T A C T G G C A T T A G C A G T C C G A T A G T C C G A T A T C G C A G T T A C G G C T A A T G C C G T A
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GWCCTCTGTGACA
TGACCTYA------
 A C G T A C T G G C A T T A G C A G T C C G A T A G T C C G A T A T C G C A G T T A C G G C T A A T G C C G T A
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GWCCTCTGTGACA---
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T A C T G G C A T T A G C A G T C C G A T A G T C C G A T A T C G C A G T T A C G G C T A A T G C C G T A A C G T A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GWCCTCTGTGACA
CNNTTGACCTTTG-----
 A C G T A C G T A C G T A C G T A C G T A C T G G C A T T A G C A G T C C G A T A G T C C G A T A T C G C A G T T A C G G C T A A T G C C G T A
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GWCCTCTGTGACA
----GCTGTG---
 A C T G G C A T T A G C A G T C C G A T A G T C C G A T A T C G C A G T T A C G G C T A A T G C C G T A
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GWCCTCTGTGACA
TGACCYCT------
 A C G T A C T G G C A T T A G C A G T C C G A T A G T C C G A T A T C G C A G T T A C G G C T A A T G C C G T A
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GWCCTCTGTGACA
NNNGTGACCTTTGNNN--
 A C G T A C G T A C G T A C G T A C G T A C T G G C A T T A G C A G T C C G A T A G T C C G A T A T C G C A G T T A C G G C T A A T G C C G T A
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A A C G T A C G T