Information for 6-AGAAGGGAAA (Motif 20)

C G T A A C T G G T C A C G T A A C T G A T C G A T C G C T G A G T C A G T C A
Reverse Opposite:
C A G T A C G T G A C T T A G C T A G C A G T C A C G T A C G T T G A C A C G T
p-value:1e-9
log p-value:-2.295e+01
Information Content per bp:1.830
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.20%
Number of Background Sequences with motif69.4
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets44.4 +/- 29.6bp
Average Position of motif in Background51.5 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AGAAGGGAAA-
CGGAAGTGAAAC
 A C G T C G T A A C T G G T C A C G T A A C T G A T C G A T C G C T G A G T C A G T C A A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

PB0033.1_Irf3_1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AGAAGGGAAA---
GAGAACCGAAACTG
 A C G T C G T A A C T G G T C A C G T A A C T G A T C G A T C G C T G A G T C A G T C A A C G T A C G T A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGAAGGGAAA--
GGAAGTGAAAST
 C G T A A C T G G T C A C G T A A C T G A T C G A T C G C T G A G T C A G T C A A C G T A C G T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGAAGGGAAA--
GRAASTGAAAST
 C G T A A C T G G T C A C G T A A C T G A T C G A T C G C T G A G T C A G T C A A C G T A C G T
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGAAGGGAAA--
GAAAGTGAAAGT
 C G T A A C T G G T C A C G T A A C T G A T C G A T C G C T G A G T C A G T C A A C G T A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGAAGGGAAA----
AGAAAGTGAAAGTGA
 A C G T C G T A A C T G G T C A C G T A A C T G A T C G A T C G C T G A G T C A G T C A A C G T A C G T A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGAAGGGAAA--
GAAAMTGAAACT
 C G T A A C T G G T C A C G T A A C T G A T C G A T C G C T G A G T C A G T C A A C G T A C G T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGAAGGGAAA--
AGAAACGAAAGT
 C G T A A C T G G T C A C G T A A C T G A T C G A T C G C T G A G T C A G T C A A C G T A C G T
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGAAGGGAAA--
--AATGGAAAAT
 C G T A A C T G G T C A C G T A A C T G A T C G A T C G C T G A G T C A G T C A A C G T A C G T
A C G T A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGAAGGGAAA
NGAAGC----
 C G T A A C T G G T C A C G T A A C T G A T C G A T C G C T G A G T C A G T C A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T