Information for 3-CAAGKGTGAY (Motif 13)

A G T C C G T A C G T A A C T G C A G T A C T G C G A T A C T G C G T A A G T C
Reverse Opposite:
T C A G C G A T A G T C C G T A G T A C G T C A G T A C C G A T C G A T A C T G
p-value:1e-10
log p-value:-2.382e+01
Information Content per bp:1.743
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.92%
Number of Background Sequences with motif54.2
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets57.4 +/- 29.8bp
Average Position of motif in Background41.9 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX1/MA0805.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CAAGKGTGAY
-AGGTGTGA-
 A G T C C G T A C G T A A C T G C A G T A C T G C G A T A C T G C G T A A G T C
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAAGKGTGAY-
-AGGTGTGAAM
 A G T C C G T A C G T A A C T G C A G T A C T G C G A T A C T G C G T A A G T C A C G T
A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

TBX15/MA0803.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAAGKGTGAY
-AGGTGTGA-
 A G T C C G T A C G T A A C T G C A G T A C T G C G A T A C T G C G T A A G T C
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAAGKGTGAY
-AGGTGTGA-
 A G T C C G T A C G T A A C T G C A G T A C T G C G A T A C T G C G T A A G T C
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T

TBX4/MA0806.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CAAGKGTGAY
-AGGTGTGA-
 A G T C C G T A C G T A A C T G C A G T A C T G C G A T A C T G C G T A A G T C
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAAGKGTGAY-
-AGGTGTGAAA
 A G T C C G T A C G T A A C T G C A G T A C T G C G A T A C T G C G T A A G T C A C G T
A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

ZEB1/MA0103.2/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAAGKGTGAY
CAGGTGAGG-
 A G T C C G T A C G T A A C T G C A G T A C T G C G A T A C T G C G T A A G T C
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T

TBX5/MA0807.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAAGKGTGAY
-AGGTGTGA-
 A G T C C G T A C G T A A C T G C A G T A C T G C G A T A C T G C G T A A G T C
A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T

PAX1/MA0779.1/Jaspar

Match Rank:9
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CAAGKGTGAY-
NGCANTCATGCGTGACG
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G C A G T A C T G C G A T A C T G C G T A A G T C A C G T
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAAGKGTGAY---
AAGGTGTGAAAAT
 A G T C C G T A C G T A A C T G C A G T A C T G C G A T A C T G C G T A A G T C A C G T A C G T A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T