Information for 2-GGACAGGACAGAT (Motif 4)

A C T G A C T G C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C T G C G A T A G T C A G T C
p-value:1e-11
log p-value:-2.694e+01
Information Content per bp:1.919
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.8 +/- 14.7bp
Average Position of motif in Background57.5 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGACAGGACAGAT
--TRAGGTCA---
 A C T G A C T G C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C G T
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGACAGGACAGAT
-NACAGGAAAT--
 A C T G A C T G C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C G T
A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGACAGGACAGAT
-NACAGGAAAT--
 A C T G A C T G C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C G T
A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGACAGGACAGAT
ANGNAAAGGTCA---
 A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGACAGGACAGAT
-CACAGN------
 A C T G A C T G C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C G T
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGACAGGACAGAT
----AGGTCA---
 A C T G A C T G C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGACAGGACAGAT
TTGACAGC------
 A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C G T
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGACAGGACAGAT
-CCAGGAACAG--
 A C T G A C T G C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C G T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGACAGGACAGAT
----TTGACAG--
 A C T G A C T G C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GGACAGGACAGAT-------
---AAGGCCAGATGGTCCGG
 A C T G A C T G C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G