p-value: | 1e-6 |
log p-value: | -1.508e+01 |
Information Content per bp: | 1.859 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.51% |
Number of Background Sequences with motif | 1.7 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 52.8 +/- 12.5bp |
Average Position of motif in Background | 21.2 +/- 8.7bp |
Strand Bias (log2 ratio + to - strand density) | -1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0001.1_Arid3a_1/Jaspar
Match Rank: | 1 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGCWTTTATTAAA---- GGGTTTAATTAAAATTC |
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PH0100.1_Lmx1a/Jaspar
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGCWTTTATTAAA---- CGAATTAATTAAAAACC |
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PH0095.1_Lhx5/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGCWTTTATTAAA---- CGAATTAATTAAATACT |
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PH0093.1_Lhx3/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGCWTTTATTAAA---- GAAATTAATTAAATAAT |
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PH0101.1_Lmx1b/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGCWTTTATTAAA---- NNAATTAATTAAAAANN |
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Arid3a/MA0151.1/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | GGCWTTTATTAAA -------ATTAAA |
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PH0091.1_Lhx1/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGCWTTTATTAAA---- CGAATTAATTAATAATG |
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PH0153.1_Prop1/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGCWTTTATTAAA---- CGAATTAATTAAGAAAC |
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PH0011.1_Alx1_2/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGCWTTTATTAAA---- CGCATTAATTAATTGGC |
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PH0063.1_Hoxb8/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GGCWTTTATTAAA ACCGGCAATTAATAAA |
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