Information for 8-CCTGAGAGGAAGCCCA (Motif 11)

A T G C A G T C C G A T C T A G C T G A A C T G C G T A A C T G C T A G G T C A C T G A A C T G A T G C A G T C A T G C C T G A
Reverse Opposite:
A G C T A T C G A C T G T A C G G T A C A G C T A C G T A G T C G T A C A C G T A G T C A G C T A G T C C G T A A C T G A T C G
p-value:1e-9
log p-value:-2.246e+01
Information Content per bp:1.806
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.5 +/- 20.8bp
Average Position of motif in Background47.6 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCTGAGAGGAAGCCCA---
----TGACANARRCCAGRC
 A T G C A G T C C G A T C T A G C T G A A C T G C G T A A C T G C T A G G T C A C T G A A C T G A T G C A G T C A T G C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCTGAGAGGAAGCCCA
--TGAGTGACAGSC--
 A T G C A G T C C G A T C T A G C T G A A C T G C G T A A C T G C T A G G T C A C T G A A C T G A T G C A G T C A T G C C T G A
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCTGAGAGGAAGCCCA
NNNACCGAGAGTNNN----
 A C G T A C G T A C G T A T G C A G T C C G A T C T A G C T G A A C T G C G T A A C T G C T A G G T C A C T G A A C T G A T G C A G T C A T G C C T G A
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCTGAGAGGAAGCCCA
-CTGGCAGNCTGCCA-
 A T G C A G T C C G A T C T A G C T G A A C T G C G T A A C T G C T A G G T C A C T G A A C T G A T G C A G T C A T G C C T G A
A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T

SPIB/MA0081.1/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCTGAGAGGAAGCCCA
----AGAGGAA-----
 A T G C A G T C C G A T C T A G C T G A A C T G C G T A A C T G C T A G G T C A C T G A A C T G A T G C A G T C A T G C C T G A
A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCTGAGAGGAAGCCCA
----GGGGGAATCCCC
 A T G C A G T C C G A T C T A G C T G A A C T G C G T A A C T G C T A G G T C A C T G A A C T G A T G C A G T C A T G C C T G A
A C G T A C G T A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFKB2/MA0778.1/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CCTGAGAGGAAGCCCA-
----AGGGGAATCCCCT
 A T G C A G T C C G A T C T A G C T G A A C T G C G T A A C T G C T A G G T C A C T G A A C T G A T G C A G T C A T G C C T G A A C G T
A C G T A C G T A C G T A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CCTGAGAGGAAGCCCA-
----AGGGGAATCCCCT
 A T G C A G T C C G A T C T A G C T G A A C T G C G T A A C T G C T A G G T C A C T G A A C T G A T G C A G T C A T G C C T G A A C G T
A C G T A C G T A C G T A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CCTGAGAGGAAGCCCA
----AGAGGAAGTG--
 A T G C A G T C C G A T C T A G C T G A A C T G C G T A A C T G C T A G G T C A C T G A A C T G A T G C A G T C A T G C C T G A
A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CCTGAGAGGAAGCCCA
CTTGAGTGGCT-----
 A T G C A G T C C G A T C T A G C T G A A C T G C G T A A C T G C T A G G T C A C T G A A C T G A T G C A G T C A T G C C T G A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T