Information for 20-SCCCTTCCMWGRA (Motif 45)

A T G C G T A C T A G C A G T C A C G T A C G T A G T C A G T C G T A C C G T A A C T G C T A G C T G A
Reverse Opposite:
A G C T A G T C A G T C C G A T A C T G A C T G A C T G C G T A C G T A A C T G A T C G A C T G A T C G
p-value:1e-5
log p-value:-1.375e+01
Information Content per bp:1.857
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif47.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets42.1 +/- 14.4bp
Average Position of motif in Background51.1 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:SCCCTTCCMWGRA-
---TTTCCCAGAAN
 A T G C G T A C T A G C A G T C A C G T A C G T A G T C A G T C G T A C C G T A A C T G C T A G C T G A A C G T
A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.72
Offset:2
Orientation:forward strand
Alignment:SCCCTTCCMWGRA
--ATTTCCAAGAA
 A T G C G T A C T A G C A G T C A C G T A C G T A G T C A G T C G T A C C G T A A C T G C T A G C T G A
A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

Stat4/MA0518.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:SCCCTTCCMWGRA-
NNNTTTCCTGGAAA
 A T G C G T A C T A G C A G T C A C G T A C G T A G T C A G T C G T A C C G T A A C T G C T A G C T G A A C G T
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

STAT1/MA0137.3/Jaspar

Match Rank:4
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:SCCCTTCCMWGRA-
---TTTCCTGGAAA
 A T G C G T A C T A G C A G T C A C G T A C G T A G T C A G T C G T A C C G T A A C T G C T A G C T G A A C G T
A C G T A C G T A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:SCCCTTCCMWGRA--
-NNCTTCCNGGAAGN
 A T G C G T A C T A G C A G T C A C G T A C G T A G T C A G T C G T A C C G T A A C T G C T A G C T G A A C G T A C G T
A C G T A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.68
Offset:3
Orientation:forward strand
Alignment:SCCCTTCCMWGRA
---CTTCCNGGAA
 A T G C G T A C T A G C A G T C A C G T A C G T A G T C A G T C G T A C C G T A A C T G C T A G C T G A
A C G T A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:SCCCTTCCMWGRA--
---TTTCCNGGAAAN
 A T G C G T A C T A G C A G T C A C G T A C G T A G T C A G T C G T A C C G T A A C T G C T A G C T G A A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-SCCCTTCCMWGRA
KGCCCTTCCCCA--
 A C G T A T G C G T A C T A G C A G T C A C G T A C G T A G T C A G T C G T A C C G T A A C T G C T A G C T G A
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:SCCCTTCCMWGRA--
---TTTCTNAGAAAN
 A T G C G T A C T A G C A G T C A C G T A C G T A G T C A G T C G T A C C G T A A C T G C T A G C T G A A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:SCCCTTCCMWGRA--
-NATTTCCNGGAAAT
 A T G C G T A C T A G C A G T C A C G T A C G T A G T C A G T C G T A C C G T A A C T G C T A G C T G A A C G T A C G T
A C G T A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T