Information for 15-ACAAGACAAC (Motif 38)

C G T A A G T C C G T A C G T A A C T G C G T A A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G A C G T
p-value:1e-6
log p-value:-1.428e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 8.6bp
Average Position of motif in Background43.0 +/- 7.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mecom/MA0029.1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ACAAGACAAC-
AAGATAAGATAACA
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C T G C G T A A G T C C G T A C G T A A G T C A C G T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACAAGACAAC
AAAAGTCAA-
 C G T A A G T C C G T A C G T A A C T G C G T A A G T C C G T A C G T A A G T C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACAAGACAAC---
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C T G C G T A A G T C C G T A C G T A A G T C A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ACAAGACAAC
-CCAGACAG-
 C G T A A G T C C G T A C G T A A C T G C G T A A G T C C G T A C G T A A G T C
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ACAAGACAAC
-BCAGACWA-
 C G T A A G T C C G T A C G T A A C T G C G T A A G T C C G T A C G T A A G T C
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACAAGACAAC------
CATAAGACCACCATTAC
 A C G T C G T A A G T C C G T A C G T A A C T G C G T A A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACAAGACAAC--
--AAAACAATGG
 C G T A A G T C C G T A C G T A A C T G C G T A A G T C C G T A C G T A A G T C A C G T A C G T
A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACAAGACAAC-
-CCAGACRSVB
 C G T A A G T C C G T A C G T A A C T G C G T A A G T C C G T A C G T A A G T C A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACAAGACAAC---
ATATCAAAACAAAACA
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C T G C G T A A G T C C G T A C G T A A G T C A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ACAAGACAAC--
--RNAACAATGG
 C G T A A G T C C G T A C G T A A C T G C G T A A G T C C G T A C G T A A G T C A C G T A C G T
A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G