Information for 14-CCTAGGCCTA (Motif 37)

A T G C G T A C A G C T C G T A A C T G A T C G A G T C A G T C A G C T C T G A
Reverse Opposite:
A G C T C T G A A C T G A C T G A T G C G T A C A C G T C T G A A C T G A T C G
p-value:1e-7
log p-value:-1.646e+01
Information Content per bp:1.859
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif46.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets49.2 +/- 25.9bp
Average Position of motif in Background49.2 +/- 37.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:CCTAGGCCTA
-CNAGGCCT-
 A T G C G T A C A G C T C G T A A C T G A T C G A G T C A G T C A G C T C T G A
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:CCTAGGCCTA
-CTAGGCCT-
 A T G C G T A C A G C T C G T A A C T G A T C G A G T C A G T C A G C T C T G A
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----CCTAGGCCTA
GGGGCCGAGGCCTG
 A C G T A C G T A C G T A C G T A T G C G T A C A G C T C G T A A C T G A T C G A G T C A G T C A G C T C T G A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCTAGGCCTA
TGACCTTGACCT-
 A C G T A C G T A C G T A T G C G T A C A G C T C G T A A C T G A T C G A G T C A G T C A G C T C T G A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCTAGGCCTA
NTCAAGGTCA-
 A C G T A T G C G T A C A G C T C G T A A C T G A T C G A G T C A G T C A G C T C T G A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCTAGGCCTA--
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A T G C G T A C A G C T C G T A A C T G A T C G A G T C A G T C A G C T C T G A A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCTAGGCCTA
TGACCTTGACCT-
 A C G T A C G T A C G T A T G C G T A C A G C T C G T A A C T G A T C G A G T C A G T C A G C T C T G A
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CCTAGGCCTA-
-CAAGGHCANV
 A T G C G T A C A G C T C G T A A C T G A T C G A G T C A G T C A G C T C T G A A C G T
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CCTAGGCCTA
CGCCTCAGGCA--
 A C G T A C G T A C G T A T G C G T A C A G C T C G T A A C T G A T C G A G T C A G T C A G C T C T G A
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CCTAGGCCTA
GCTCGGSCTC
 A T G C G T A C A G C T C G T A A C T G A T C G A G T C A G T C A G C T C T G A
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C